Sequence 1: | NP_001261207.1 | Gene: | trh / 38065 | FlyBaseID: | FBgn0262139 | Length: | 1022 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001034895.2 | Gene: | epas1b / 555192 | ZFINID: | ZDB-GENE-060607-11 | Length: | 834 | Species: | Danio rerio |
Alignment Length: | 906 | Identity: | 233/906 - (25%) |
---|---|---|---|
Similarity: | 362/906 - (39%) | Gaps: | 265/906 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 ELRKEKSRDAARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDF--SGHGDP 147
Fly 148 PWTREASSSSKLKSAAIRRSPAVDLFEQHQGTHILQSLDGFALAVAADGRFLYISETVSIYLGLS 212
Fly 213 QVEMTGSSIFDYIHQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGGGAGGGMASPTSGASDDGS 277
Fly 278 GTHGTNNPDVAASMTQASTSGYKGYDRSFCVRMKSTLTKRG--CHFKSSGYRASDATSN---CNN 337
Fly 338 GNNASNNAKNVKNPGSNYSVVLLLCKLRPQYTFSHSRKSQPPLLGMVALAIALPPPSVHEIRLEC 402
Fly 403 DMFVTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGY 467
Fly 468 YRLMNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVISNRENENMILDCCQLEP--SPDSI--- 527
Fly 528 -KHEEGLGNDKS-----------------SGSPG--------GDASGEGN---SHLSAGDMKLNS 563
Fly 564 PKTDSEGHSHRGRGRSAAASHGSSMNSLTMIKDSPTPLGVEIDSGVLPTTVATPVPAATPPVQST 628
Fly 629 KRKRKTKASQHAEDQGQEQVISEQPL----PKLPTMEQRDQQPRSRLPSIVDEQPSSAAD----- 684
Fly 685 ----SAVKDLEQAMSKHLPSPAAV-------------------VSVAPPNTDFSADSLLKQQQQQ 726
Fly 727 QQLDP-NEKSST----------IQWIGTPYQQPPAPMPATA-LLRQLYANRESVIRATARQTPTG 779
Fly 780 VGPGVFYGDQQTGPLPTPPGSESSYENQYLQLHSAASGGHPGGQKTSADAFTNLVSTYGGYHSSI 844
Fly 845 DYHNAMTPPS---------------SVSPRDS-NQPGKAAPVLASNGGYDYAPDPLRGQYA 889 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trh | NP_001261207.1 | HLH | 85..137 | CDD:238036 | 36/51 (71%) |
PAS | 176..236 | CDD:214512 | 26/59 (44%) | ||
PAS | 180..>236 | CDD:279347 | 26/55 (47%) | ||
PAS | 403..505 | CDD:238075 | 43/101 (43%) | ||
PAS_3 | 415..502 | CDD:285623 | 37/86 (43%) | ||
epas1b | NP_001034895.2 | HLH | 12..68 | CDD:238036 | 37/54 (69%) |
PAS | 92..147 | CDD:214512 | 26/56 (46%) | ||
PAS | 238..337 | CDD:238075 | 39/98 (40%) | ||
PAS_3 | 251..338 | CDD:285623 | 37/86 (43%) | ||
HIF-1 | 511..543 | CDD:288296 | 11/36 (31%) | ||
HIF-1a_CTAD | 798..833 | CDD:285931 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170592822 | |
Domainoid | 1 | 1.000 | 101 | 1.000 | Domainoid score | I6867 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3558 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000232 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.740 |