Sequence 1: | NP_001261207.1 | Gene: | trh / 38065 | FlyBaseID: | FBgn0262139 | Length: | 1022 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001287599.1 | Gene: | sima / 43580 | FlyBaseID: | FBgn0266411 | Length: | 1593 | Species: | Drosophila melanogaster |
Alignment Length: | 1070 | Identity: | 255/1070 - (23%) |
---|---|---|---|
Similarity: | 387/1070 - (36%) | Gaps: | 360/1070 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 PTPGHPGSHMATMGSLGMPAVPFTHSWMVPTQDLCAMPPYNKMTGHQQPPGAGMHAQQ------- 76
Fly 77 ----------------------QPLEPGIL---------ELRKEKSRDAARSRRGKENYEFYELA 110
Fly 111 KMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWTREASSSSK--LKSAAIRR--SPAVD 171
Fly 172 LFEQHQGTH-----------ILQSLDGFALAVAADGRFLYISETVSIYLGLSQVEMTGSSIFDYI 225
Fly 226 HQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGGGAGGGMASPTSGASDDGSGTHGTNNPDVAAS 290
Fly 291 MTQASTSGYKGYDRSFCVRMKSTLTKRG--CHFKSSGYRASDATSNCNNGNNASNNAKNVKNPGS 353
Fly 354 NYSVVLLLCKLRPQYTFSHSRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHC 418
Fly 419 EPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWLQTC 483
Fly 484 ATVVCSTKNADEQNIICVNYVISNRENENMILDCC-QLEPSPDSIKHEEGLGNDKSSGSPGGDAS 547
Fly 548 GEGNSHLSAGDMK--LNSPKTDSEGHSHRGRGRSAAASHGSSMNSLTMIKDSPTPLGVEIDSGVL 610
Fly 611 PTTVATPVPAATPPVQSTKRKRKTKASQHAEDQGQEQVISEQPLPKLPTMEQRDQQPRSRLPSIV 675
Fly 676 DEQPSSAADSAVKDLEQAMSKHLPSPAAVVSVAPPNTDFSADSLLKQQQQQQQLDPNEKSSTIQW 740
Fly 741 IGTPYQQPPAPMPATALLRQLYANRESVIRATARQTPTGVGPGVFYGDQQTGPLPTPPGSESSYE 805
Fly 806 NQYLQLHSAASGGHPGGQKTSAD---AFTNLVSTYG-------GYHSSIDYHNA---------MT 851
Fly 852 PPSS---------VSPRDSNQPGKAAPVLASNGGYDYAPDPLRGQYATSSGDVVPATLPLKPQAS 907
Fly 908 YTATMHPSGSTTTEGGVTYSNLDQPQYFAPHSSFHLYHKGSPASGWYSTPSXVVDDQGQVPPSCQ 972
Fly 973 DQYHHHH----------HHHHHQDGSAGSS 992 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trh | NP_001261207.1 | HLH | 85..137 | CDD:238036 | 30/51 (59%) |
PAS | 176..236 | CDD:214512 | 24/70 (34%) | ||
PAS | 180..>236 | CDD:279347 | 22/66 (33%) | ||
PAS | 403..505 | CDD:238075 | 38/101 (38%) | ||
PAS_3 | 415..502 | CDD:285623 | 31/86 (36%) | ||
sima | NP_001287599.1 | HLH | 156..209 | CDD:238036 | 30/52 (58%) |
PAS | 256..392 | CDD:279347 | 49/215 (23%) | ||
PAS | 265..>317 | CDD:238075 | 21/51 (41%) | ||
PAS | 404..505 | CDD:238075 | 38/102 (37%) | ||
PAS_3 | 417..502 | CDD:285623 | 31/86 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45466435 | |
Domainoid | 1 | 1.000 | 51 | 1.000 | Domainoid score | I7753 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D393498at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000232 | |
OrthoInspector | 1 | 1.000 | - | - | otm14250 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR23043 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.950 |