Sequence 1: | NP_001261207.1 | Gene: | trh / 38065 | FlyBaseID: | FBgn0262139 | Length: | 1022 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001296971.1 | Gene: | hif1ab / 393202 | ZFINID: | ZDB-GENE-040426-706 | Length: | 777 | Species: | Danio rerio |
Alignment Length: | 883 | Identity: | 228/883 - (25%) |
---|---|---|---|
Similarity: | 353/883 - (39%) | Gaps: | 278/883 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 ELRKEKSRDAARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 149
Fly 150 TREASSSSKLKSAAIRRSPAVDLFEQHQGTHILQSLDGFALAVAADGRFLYISETVSIYLGLSQV 214
Fly 215 EMTGSSIFDYIHQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGGGAGGGMASPTSGASDDGSGT 279
Fly 280 HGTNNPDVAASMTQASTSGYKGYDRSFCVRMKSTLTKRG--CHFKSSGYRASDATSN--CNNGNN 340
Fly 341 ASNNAKNVKNPGSNYSVVLLLCKLRPQYTFSHSRKSQPPLLGMVALAIALPPPSVHEIRLECDMF 405
Fly 406 VTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRL 470
Fly 471 MNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVISNRENENMILDCCQLEPSPDSIKHEEGLGN 535
Fly 536 DKSS------------------------------------GSPGGDASGEGNSHLSAGDMKL--- 561
Fly 562 -------------------NSPKTDSEGHSHRGRGRSAAASHGSSMNSLTMIKDS---------- 597
Fly 598 ---PTPLGVEIDSGVLPTTVATPVPAATP--PVQSTKRKRKTKASQHAEDQGQEQVISEQPL--- 654
Fly 655 ------PKLPTMEQRDQQPRSRLPSIVDEQPSSA-ADSAVKDLEQAMSKHLPSPAAVVSVAPPNT 712
Fly 713 DFSADSLLKQQQQQQQLDPNEKSSTIQWIGTPYQQPPAPMPATALLRQLYANRESVIRATARQTP 777
Fly 778 TGVGPGVFYGDQQTGPL-PTPPGSESSYENQYLQLHSAASGGHPGGQK----TSADAFTNLVSTY 837
Fly 838 GGYHSSIDYHNAMTPPSSVSPRDSNQPGKAAPVLASNG 875 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trh | NP_001261207.1 | HLH | 85..137 | CDD:238036 | 40/51 (78%) |
PAS | 176..236 | CDD:214512 | 24/59 (41%) | ||
PAS | 180..>236 | CDD:279347 | 23/55 (42%) | ||
PAS | 403..505 | CDD:238075 | 43/101 (43%) | ||
PAS_3 | 415..502 | CDD:285623 | 37/86 (43%) | ||
hif1ab | NP_001296971.1 | HLH | 14..74 | CDD:238036 | 42/58 (72%) |
PAS | 94..149 | CDD:214512 | 23/54 (43%) | ||
PAS | 239..338 | CDD:238075 | 39/98 (40%) | ||
PAS_3 | 254..339 | CDD:285623 | 37/84 (44%) | ||
HIF-1 | 543..574 | CDD:288296 | 9/34 (26%) | ||
HIF-1a_CTAD | 740..776 | CDD:285931 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170592837 | |
Domainoid | 1 | 1.000 | 101 | 1.000 | Domainoid score | I6867 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3558 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000232 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.740 |