Sequence 1: | NP_001261207.1 | Gene: | trh / 38065 | FlyBaseID: | FBgn0262139 | Length: | 1022 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034267.3 | Gene: | Epas1 / 13819 | MGIID: | 109169 | Length: | 874 | Species: | Mus musculus |
Alignment Length: | 1000 | Identity: | 247/1000 - (24%) |
---|---|---|---|
Similarity: | 372/1000 - (37%) | Gaps: | 293/1000 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 ELRKEKSRDAARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW 149
Fly 150 TREASSSSKLKSAAIRRSPAVDLFEQHQGTHILQSLDGFALAVAADGRFLYISETVSIYLGLSQV 214
Fly 215 EMTGSSIFDYIHQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGGGAGGGMASPTSGASDDGSGT 279
Fly 280 HGTNNPDVAASMTQASTSGYKGYDRSFCVRMKSTLTKRG--CHFKSSGYRASDATSNCNNGNNAS 342
Fly 343 NNAKNVKNPGSNYSVVLLLCKLRPQYTFSHSRKSQPPLLG-MVALAIALPPPSVHEIRLECDMFV 406
Fly 407 TRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLM 471
Fly 472 NKSGGYTWLQTCATVVCSTKNADEQNIICVNYVISNRENENMILDCCQLE--------------P 522
Fly 523 SPDSIKHEE-------GLGNDKSSGSPGGDASGEGNSHLSAGDMKLNSPKTDSEGHSHRGRGR-- 578
Fly 579 -SAAASHGSSMNSLTMIKDSPTPLGVEIDSGVLP--TTVATPVPAATPPVQSTKRKRKTKASQHA 640
Fly 641 EDQGQEQVISEQPLPKLPTMEQRDQQPRSR--------LPSIVDEQPSSAADSAVKDL--EQAMS 695
Fly 696 KHLPSP------AAVVSVAPPNTDFSADSLLKQQQQQQQLDPNEKSSTIQW-------------- 740
Fly 741 -------IGTPY---------QQPPAPMPATALLRQLYANRESVIRATARQTPTGVGPGVF-YGD 788
Fly 789 QQT---GPLPT------PPGS--------------------------------------ESSYEN 806
Fly 807 QYLQLHSAASGGHPGGQKTSADAFTNLVSTYGGY-----HSSIDYHNA----------------- 849
Fly 850 -MTPPSSVSPRDSNQPGKAA--PVLASNGGYDYAPDPLRGQYATSSGDVVPATLP-LKPQAS-YT 909
Fly 910 ATMH---PSGSTTTEGGVTYSNLDQ 931 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trh | NP_001261207.1 | HLH | 85..137 | CDD:238036 | 36/51 (71%) |
PAS | 176..236 | CDD:214512 | 26/59 (44%) | ||
PAS | 180..>236 | CDD:279347 | 26/55 (47%) | ||
PAS | 403..505 | CDD:238075 | 42/101 (42%) | ||
PAS_3 | 415..502 | CDD:285623 | 36/86 (42%) | ||
Epas1 | NP_034267.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..23 | 9/9 (100%) | |
HLH | 12..68 | CDD:238036 | 37/72 (51%) | ||
DNA-binding. /evidence=ECO:0000269|PubMed:26245371 | 26..53 | 15/26 (58%) | |||
PAS | 86..147 | CDD:214512 | 26/60 (43%) | ||
Required for heterodimer formation with ARNT. /evidence=ECO:0000269|PubMed:26245371 | 171..192 | 9/20 (45%) | |||
PAS | 241..340 | CDD:238075 | 38/98 (39%) | ||
PAS_3 | 254..341 | CDD:285623 | 36/86 (42%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 438..489 | 14/67 (21%) | |||
NTAD | 495..541 | 8/45 (18%) | |||
HIF-1 | 516..548 | CDD:288296 | 3/31 (10%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 777..803 | 6/25 (24%) | |||
CTAD | 834..874 | 10/38 (26%) | |||
HIF-1a_CTAD | 837..873 | CDD:285931 | 10/35 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167847524 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3558 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000232 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |