DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and Zfp423

DIOPT Version :9

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:XP_011246862.1 Gene:Zfp423 / 94187 MGIID:1891217 Length:1312 Species:Mus musculus


Alignment Length:470 Identity:105/470 - (22%)
Similarity:162/470 - (34%) Gaps:158/470 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   783 LSLGPNQVPEGGKCLVEGCMFRFKSPVTLEY---HGRCHNGSLSSNQPVVCPECKSSNFSNWNCL 844
            |.||..   |||..|...|.|..||.:.|.|   |.:.|:..|    |..|..| |..|.:....
Mouse   153 LGLGEE---EGGTGLPYPCQFCDKSFIRLSYLKRHEQIHSDKL----PFKCTFC-SRLFKHKRSR 209

  Fly   845 HTHLWRTHQIDMELYSCQLCSFKTPIYSRL--VNTHAKIHSEERNYKCEQCGKGFKNTKQLKNHR 907
            ..|: :.|..|.: |.|..|.   ..:||.  :..|.|.||..:.:||..|.:||.:|..|::|.
Mouse   210 DRHI-KLHTGDKK-YHCHECE---AAFSRSDHLKIHLKTHSSSKPFKCSVCKRGFSSTSSLQSHM 269

  Fly   908 RLHRTQGLGMGKQSNEQISVGPEGNPVVMHRCEDCGAAFKQKKTLREHLCK-----ERNEQLECP 967
            :.|        |::.|.::...:........|:.|...|.|.:.|.:|:..     .....|:|.
Mouse   270 QAH--------KKNKEHLAKSEKEAKKDDFMCDYCEDTFSQTEELEKHVLTLHPQLSEKADLQCI 326

  Fly   968 ECQRRFGSKSSLRLHLRSHQEH--KRFRCDTCDHETSDHNAYRRHLATHKE-------------- 1016
            .|...|..:|:|..|:  ||.|  ::.:|..|..:.|.......||.:|::              
Mouse   327 HCPEVFVDESTLLAHI--HQAHANQKHKCPMCPEQFSSVEGVYCHLDSHRQPDSSNHSVSPDPVL 389

  Fly  1017 --------------------------------SKR------------YSCPHCDFRAIQSTA-FR 1036
                                            .|:            ||||:|..|...|.| ..
Mouse   390 GSVASMSSATPDSSASVERGSTPDSTLKPLRGQKKMRDDGQSWPKVVYSCPYCSKRDFTSLAVLE 454

  Fly  1037 IHLQTRH---PEQELSTII----------------------------------YKCNQC--NFTS 1062
            |||:|.|   |:|..:..|                                  :.||.|  .|..
Mouse   455 IHLKTIHADKPQQSHTCQICLDSMPTLYNLNEHVRKLHKSHAYPVMQFGNISAFHCNYCPEMFAD 519

  Fly  1063 INQGLLQVH--------QAKHDAGNH----NQTLASSQGDVPVEKQSQIKVESNLVLAH---SST 1112
            ||.  ||.|        .|....||:    ||   .|.|.:     ::..:..::..||   .||
Mouse   520 INS--LQEHIRVSHCGPNANPPDGNNAFFCNQ---CSMGFL-----TESSLTEHIQQAHCSVGST 574

  Fly  1113 KVATEVIKAQENILQ 1127
            |:.:.|::..::.::
Mouse   575 KLESPVVQPTQSFME 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368 5/21 (24%)
C2H2 Zn finger 861..882 CDD:275368 6/22 (27%)
zf-H2C2_2 875..899 CDD:290200 9/23 (39%)
zf-C2H2 888..910 CDD:278523 8/21 (38%)
C2H2 Zn finger 890..910 CDD:275368 7/19 (37%)
zf-C2H2_2 893..999 CDD:289522 27/112 (24%)
C2H2 Zn finger 939..956 CDD:275368 5/16 (31%)
RPB9 966..1061 CDD:224510 35/194 (18%)
C2H2 Zn finger 966..986 CDD:275368 6/19 (32%)
C2H2 Zn finger 994..1014 CDD:275368 5/19 (26%)
C2H2 Zn finger 1022..1042 CDD:275368 9/20 (45%)
C2H2 Zn finger 1055..1075 CDD:275368 10/29 (34%)
Zfp423XP_011246862.1 C2H2 Zn finger 168..188 CDD:275368 7/19 (37%)
C2H2 Zn finger 196..216 CDD:275368 5/21 (24%)
COG5048 222..623 CDD:227381 81/391 (21%)
C2H2 Zn finger 224..244 CDD:275368 6/22 (27%)
C2H2 Zn finger 252..272 CDD:275368 7/19 (37%)
C2H2 Zn finger 293..312 CDD:275368 6/18 (33%)
C2H2 Zn finger 439..460 CDD:275368 9/20 (45%)
C2H2 Zn finger 471..495 CDD:275368 1/23 (4%)
C2H2 Zn finger 510..529 CDD:275368 9/20 (45%)
C2H2 Zn finger 692..712 CDD:275368
C2H2 Zn finger 722..743 CDD:275368
C2H2 Zn finger 750..771 CDD:275368
C2H2 Zn finger 780..801 CDD:275368
C2H2 Zn finger 811..831 CDD:275368
C2H2 Zn finger 837..855 CDD:275368
C2H2 Zn finger 916..937 CDD:275368
C2H2 Zn finger 960..980 CDD:275368
C2H2 Zn finger 989..1009 CDD:275368
C2H2 Zn finger 1228..1248 CDD:275368
C2H2 Zn finger 1259..1280 CDD:275368
C2H2 Zn finger 1289..1305 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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