DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and Zbtb10

DIOPT Version :9

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_077815.2 Gene:Zbtb10 / 80338 RGDID:708377 Length:890 Species:Rattus norvegicus


Alignment Length:455 Identity:91/455 - (20%)
Similarity:148/455 - (32%) Gaps:117/455 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 ITTKQKIFIKNVDILKAPQRGTLHLRTVDELNLMNRTEVEHLIVPNLEPMAMTM-----MELPPV 585
            |....|||..:.:||.|..|....|..|......|:....||.:..::..::.:     ..|...
  Rat   388 IVVSGKIFKAHKNILVAGSRFFKTLYCVSNKESPNQNNTTHLDIAAVQGFSVILDFLYSGNLVLT 452

  Fly   586 QQQPMEVTS-----QLKGPTETLGEF-QPSISESWPSEDGYDLPEDLECWPWMEDAVPEAGLVLP 644
            .|..:||.:     |:....:|...| :.:::.|..||    .||.:.........|...||...
  Rat   453 SQNAIEVMTVASYLQMSEVVQTCRNFIKDALNISIKSE----APESVVVDYNNRKPVSRDGLTSS 513

  Fly   645 TPSEVANAPPLDGLSHNAVDLLVKDFSHLYAAPPEDTQNAEEGTAAGGRGTVPPLVPVTSSEGTA 709
            ...::|:......|::.|.::.:::          |..|.:||.....:......|    .:|:.
  Rat   514 RDQKIASFWATRNLTNLASNIKIEN----------DGCNVDEGQIENYQMNDSNWV----QDGSP 564

  Fly   710 SVAQSAALGSLPV----------------------------PPLVPLAAEMNAAIEKPARIYVAN 746
            .:|::.:.|...|                            ||......|..:.::.|......|
  Rat   565 ELAENESQGKTKVFIWNNMASQETGKARRKNQTTKRFVYNIPPNSETIVEDCSVMQPPVAYPEEN 629

  Fly   747 NLL-----PAA-VDPPLLGGGTSVR----------------GRPYGAKHS------GGAASKRKL 783
            ..|     |.: :|..||.|....|                |...||.|.      .|.:|..|.
  Rat   630 KALLIKEEPVSDLDGALLSGPDGDRTMNTNLLAEACSSQDAGDAAGASHDFKYGLMPGTSSDFKY 694

  Fly   784 SLGPNQVPEGGKCLVEGCMFRFKSPVTLEYHGRCHNGSLSSNQPVVCPECKSSNFSNWNCLHTHL 848
            .|.|:...:....|:.|      :|...:|      |.|..:.|...|                 
  Rat   695 GLLPSTSNDFKYGLLPG------APNDFKY------GLLPESWPTQEP----------------- 730

  Fly   849 WRT--HQIDMELYSCQLCSFKTPIYSRLVNTHAKIHSEERNYKCEQCGKGFKNTKQLKNHRRLHR 911
            |..  ..:.|....|..||:... |.|.:..|..|||..|::|||.|||.|...:.:|.|..:|:
  Rat   731 WENGDSSLIMNKLKCPHCSYVAK-YRRTLKRHLLIHSGVRSFKCEICGKMFTRREHVKRHSLVHK 794

  Fly   912  911
              Rat   795  794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368 2/23 (9%)
C2H2 Zn finger 861..882 CDD:275368 6/20 (30%)
zf-H2C2_2 875..899 CDD:290200 12/23 (52%)
zf-C2H2 888..910 CDD:278523 9/21 (43%)
C2H2 Zn finger 890..910 CDD:275368 8/19 (42%)
zf-C2H2_2 893..999 CDD:289522 7/19 (37%)
C2H2 Zn finger 939..956 CDD:275368
RPB9 966..1061 CDD:224510
C2H2 Zn finger 966..986 CDD:275368
C2H2 Zn finger 994..1014 CDD:275368
C2H2 Zn finger 1022..1042 CDD:275368
C2H2 Zn finger 1055..1075 CDD:275368
Zbtb10NP_077815.2 ZnF_TTF 240..>307 CDD:214739
BTB_POZ 363..484 CDD:365784 20/95 (21%)
zf-H2C2_5 743..767 CDD:404746 8/24 (33%)
C2H2 Zn finger 745..765 CDD:275368 6/20 (30%)
zf-H2C2_2 758..782 CDD:404364 12/23 (52%)
C2H2 Zn finger 773..793 CDD:275368 8/19 (42%)
zf-H2C2_2 785..808 CDD:404364 3/10 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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