DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and Zfp316

DIOPT Version :9

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_059495.3 Gene:Zfp316 / 54201 MGIID:1860402 Length:1017 Species:Mus musculus


Alignment Length:481 Identity:120/481 - (24%)
Similarity:174/481 - (36%) Gaps:129/481 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   623 PEDLECWPWMEDAVPEAGL--------------VLPTPSEVANAPPL--------------DGLS 659
            ||:||..| .|...||||:              |:..|:..|..|..              :||:
Mouse   540 PEELEAAP-AETEEPEAGVADGDTEAEARQDEQVVVAPAAEATVPDSKKDPEPDRRFREMGNGLA 603

  Fly   660 HNA----------VDLLVKDFSHLYAAP----PEDTQNAEEGTAAGGRGTVPPLVPVTSSEGTA- 709
            ...          ..:..|.:.|....|    ||.::..:    |.||....||....|.:|.. 
Mouse   604 EGEGPSSHPFGFHFPMHPKSWLHPDGFPILGFPEFSERLQ----ADGRHLPGPLGSPLSLQGMGL 664

  Fly   710 ------SVAQSAAL--GSLPVPPLVPLAAEMNAAIEKPARIYVANNLLPAAV---DPPLLGGGTS 763
                  ||...|.:  |....||.|      .:.:.:||         |||:   :.|.:   .|
Mouse   665 ACDPFRSVGPGAGVDGGLRAFPPAV------RSLLSEPA---------PAALAEEESPWI---CS 711

  Fly   764 VRGRPYG-----AKHSGGAASKRKLSLGPNQVPEGGKCLVEGCMFRFKSPVTLEYHGRCHNGSLS 823
            ..|:.:|     |||....|.:|     |::..:.||..|.|.        .|..|.|.|.|   
Mouse   712 DCGKTFGRRAALAKHQRYHAGER-----PHRCADCGKSFVYGS--------HLARHRRTHTG--- 760

  Fly   824 SNQPVVCPECKSSNFSNWNCLHTHLWRTHQIDMELYSCQLCSFKTPIYSRL--VNTHAKIHSEER 886
             .:|..|||| .:.|:..:.|..|: |.|..: :.:.|.:|...   :||.  :..|.:.|:.||
Mouse   761 -ERPFPCPEC-GARFARGSHLAAHV-RGHTGE-KPFVCGVCGAG---FSRRAHLTAHGRAHTGER 818

  Fly   887 NYKCEQCGKGFKNTKQLKNHRRLHRTQGLGMGKQSNEQISVGPEGNPVVMHRCEDCGAAFKQKKT 951
            .|.|.:||:.|..:..|..|:..|                  .|..|   |||.|||..|.....
Mouse   819 PYACAECGRRFGQSAALTRHQWAH------------------AEEKP---HRCPDCGKGFGHSSD 862

  Fly   952 LREHLCKERNEQ-LECPECQRRFGSKSSLRLHLRSHQEHKRFRCDTCDHETSDHNAYRRHLATHK 1015
            .:.|......|: ..|.:|.|.|..:|:|..|.|.|...:.|.|..|....|..:....|..||.
Mouse   863 FKRHRRTHTGEKPFRCADCGRGFAQRSNLAKHRRGHTGERPFPCPECGKRFSQRSVLVTHQRTHT 927

  Fly  1016 ESKRYSCPHCDFRAIQSTAFRIHLQT 1041
            ..:.|.|.:|..|..||:....|::|
Mouse   928 GERPYLCSNCGRRFSQSSHLLTHMKT 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368 8/21 (38%)
C2H2 Zn finger 861..882 CDD:275368 5/22 (23%)
zf-H2C2_2 875..899 CDD:290200 9/23 (39%)
zf-C2H2 888..910 CDD:278523 7/21 (33%)
C2H2 Zn finger 890..910 CDD:275368 6/19 (32%)
zf-C2H2_2 893..999 CDD:289522 29/106 (27%)
C2H2 Zn finger 939..956 CDD:275368 5/16 (31%)
RPB9 966..1061 CDD:224510 24/76 (32%)
C2H2 Zn finger 966..986 CDD:275368 8/19 (42%)
C2H2 Zn finger 994..1014 CDD:275368 4/19 (21%)
C2H2 Zn finger 1022..1042 CDD:275368 7/20 (35%)
C2H2 Zn finger 1055..1075 CDD:275368
Zfp316NP_059495.3 KRAB 155..215 CDD:214630
COG5048 <339..499 CDD:227381
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
zf-H2C2_2 383..408 CDD:372612
C2H2 Zn finger 399..419 CDD:275368
C2H2 Zn finger 427..447 CDD:275368
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 483..501 CDD:275368
PRK13108 <507..584 CDD:237284 13/44 (30%)
C2H2 Zn finger 710..730 CDD:275368 6/19 (32%)
zf-C2H2 710..730 CDD:333835 6/19 (32%)
zf-H2C2_2 722..747 CDD:372612 8/29 (28%)
C2H2 Zn finger 738..758 CDD:275368 7/27 (26%)
COG5048 <763..950 CDD:227381 59/213 (28%)
C2H2 Zn finger 766..786 CDD:275368 8/21 (38%)
C2H2 Zn finger 794..814 CDD:275368 5/22 (23%)
C2H2 Zn finger 822..842 CDD:275368 6/19 (32%)
C2H2 Zn finger 850..870 CDD:275368 6/19 (32%)
C2H2 Zn finger 878..898 CDD:275368 8/19 (42%)
C2H2 Zn finger 906..926 CDD:275368 4/19 (21%)
C2H2 Zn finger 934..954 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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