DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and znf639

DIOPT Version :10

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:XP_012818342.1 Gene:znf639 / 448534 XenbaseID:XB-GENE-963474 Length:430 Species:Xenopus tropicalis


Alignment Length:476 Identity:113/476 - (23%)
Similarity:170/476 - (35%) Gaps:108/476 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   640 GLVLPTPSEVANAPPLDGLSHNAVDLLVKDFSHLYAAPP-----EDTQNAEEGTAAGGRGT---- 695
            |..:| |.:||.  |:....:|.:     .|.|.|:..|     ...|..||..:..|..|    
 Frog    22 GSAVP-PPDVAG--PVKTTENNGI-----FFDHCYSVCPIVQVDPKPQEIEEELSVNGDITDVCD 78

  Fly   696 VPPLVPVTSSEGTASVAQSAALGSLPVPPL------VPLAAEMNAAIEKPARIYVANNLLPAAVD 754
            .|.::|....|.......:....|:|.|.:      :||  :||   |.|.....:|...|... 
 Frog    79 SPTIIPQPVHEDVIVEVLTEEAESVPSPAIEEEIKDIPL--QMN---ESPENSPSSNLTTPQKW- 137

  Fly   755 PPLLGGGTSVRGR----PYGAKHSGGAASKRKLSLGPNQVPEGGKCLVEGCMFRFKSPVTLEYHG 815
             |||...:|...|    .|.:|:....  |:.:.| .::..|...|.|  |...|.|...|..||
 Frog   138 -PLLRANSSGLFRCEQCDYNSKYFSDL--KQHMIL-KHKCAESHICKV--CKQTFLSEELLLEHG 196

  Fly   816 RCHNGSLSSNQPVVCPEC--KSSNFSNWNCLHTHLWRTHQIDMELYSCQLCSFKTPIYSRLVNTH 878
            :.|    ...:.:||..|  |:|:|.:   |:.|:...|..|. ||.|:.|..:....|.|. .|
 Frog   197 KLH----EEEEELVCKHCDYKTSSFES---LNQHVADAHFNDF-LYWCEQCDLQFCTSSELY-LH 252

  Fly   879 AKIHSEERNYKCEQCGKGFKNTKQLKNH-------RRLHRTQGLGMGKQSN----EQISVGPEGN 932
            .:.||.:..|.|:.|.....:.:.|.:|       |.:..:.....|:...    .:||.....|
 Frog   253 FQEHSCDEQYLCQFCEHETNDPEDLHSHVVNEHTCRLIELSDAYNNGEHGQFSLLNKISFDKSKN 317

  Fly   933 PVVMHRCEDCGAAFKQKKTLREHLCKERNEQLECPECQRRFGSKSSLRLHLRSHQ----EHKRF- 992
            ..|   |:.||                             |.|    |||...::    ||.|| 
 Frog   318 FFV---CQVCG-----------------------------FSS----RLHTNVNRHVAIEHTRFF 346

  Fly   993 --RCDTCDHETSDHNAYRRHLATHKESKRYSCPHCDFRAIQSTAFRIHLQTRHPEQELSTIIYKC 1055
              .||.|....|....|.:||..|.....|.|.:|::...|....:.||..||.    :.:.:||
 Frog   347 PHVCDDCGKGFSGMLEYSQHLNLHSSEGVYLCQYCEYSTGQLEDLKTHLDFRHS----TDMPHKC 407

  Fly  1056 NQCNFTSINQGLLQVHQAKHD 1076
            .:|.....::..|..|...|:
 Frog   408 RKCLLRFGSEEKLNSHLLSHE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 COG5236 814..>1043 CDD:227561 59/248 (24%)
C2H2 Zn finger 830..852 CDD:275368 7/23 (30%)
C2H2 Zn finger 861..882 CDD:275368 5/20 (25%)
C2H2 Zn finger 890..910 CDD:275368 5/26 (19%)
C2H2 Zn finger 939..956 CDD:275368 3/16 (19%)
C2H2 Zn finger 966..986 CDD:275368 5/19 (26%)
C2H2 Zn finger 994..1014 CDD:275368 7/19 (37%)
C2H2 Zn finger 1022..1042 CDD:275368 5/19 (26%)
C2H2 Zn finger 1055..1075 CDD:275368 4/19 (21%)
znf639XP_012818342.1 zf-H2C2_5 148..172 CDD:404746 5/26 (19%)
C2H2 Zn finger 150..171 CDD:275368 4/23 (17%)
C2H2 Zn finger 179..199 CDD:275368 8/21 (38%)
C2H2 Zn finger 207..224 CDD:275368 6/19 (32%)
C2H2 Zn finger 236..252 CDD:275368 4/16 (25%)
C2H2 Zn finger 321..342 CDD:275368 8/53 (15%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
C2H2 Zn finger 378..399 CDD:275368 5/20 (25%)
C2H2 Zn finger 407..427 CDD:275368 4/19 (21%)

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