DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1233 and hang

DIOPT Version :9

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster


Alignment Length:1425 Identity:258/1425 - (18%)
Similarity:410/1425 - (28%) Gaps:524/1425 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GGFFDEEL------------VIGSGSGSASASAANTTPSGTTLWLADG----GNRSPTEVAVESQ 94
            |||||:.|            .:.:....|:.:||:|..:     :.||    ..|....|.|..:
  Fly   177 GGFFDQHLHQQQQHHQHLENELEAEKEKATPTAASTAAN-----ILDGIHSLKKRKSLTVYVSPK 236

  Fly    95 PNQGIPFVQIHTTDLQQPEKSYRNAFRRRTAEIKS-EELIKSELAEAAAKDRLNATPTPPTRNSS 158
            |.| :...|:....||.|        .|.||.|.| ::.:::.|.:..|....:.:.|..:..|:
  Fly   237 PQQ-MQQHQLQQLQLQPP--------ARMTATISSAQQSLQTLLLQVPASAAASCSSTSTSTTSA 292

  Fly   159 CASVEGKAIIQEGPPLILRCPNCPFLSLCQMRLQQHLSQGNCYMEQHRKQCPGCSNIFYTSDALS 223
            ....|.:.                    .|.|.|.|  |...|...|::|               
  Fly   293 SQQREQQQ--------------------HQQRQQSH--QYRRYHHHHQQQ--------------- 320

  Fly   224 LHLSLDHQMEDSETLALMGRKVT--EAQTKKQTQMSQSQNRP------------------KSRIF 268
                   |.:..:.....|:::.  ..|.::|....|.|.||                  |.:::
  Fly   321 -------QQQQQQQHNQRGKQMLPHHQQHQQQHHRRQRQFRPQRPLPVPVVNPAPTLRKFKPKLY 378

  Fly   269 IKSVDCLREPLPDFP-----PLMPDSG-------SAANILDLLEGVA------------------ 303
            : .:|....|||..|     |.:|..|       .||.:|..:.|||                  
  Fly   379 L-PLDITVPPLPPLPTIPSIPTLPPVGPGSIAPPPAAELLPGISGVAGMVESLSLSLPLDFSQSC 442

  Fly   304 ----------VGASPTEQTMPTAPAANLPAPPPKPIQKISIKSVDVLRETALLP--FDFQLQNHS 356
                      .|...|..|....|.:.:.|.|...:...:..|..|.....|:|  ....:::..
  Fly   443 SSSGHVQHQQAGGLATSTTTSNPPGSVVSATPSASVSASASASASVSTAPLLMPPLPAMPIKDEP 507

  Fly   357 VNTDN-----SLPEVPDVVGEPEKPRQPKIYIRNVDILKEPMVLPSALPGL---GFNSTMPSAAE 413
            ::||:     |:.|..|:|       .|.:::...:...:..:..|.....   |.|::..:|:.
  Fly   508 IDTDDDYQMKSIDESDDMV-------DPTMFLERSEHEGDVPLTASDYDYTAQHGVNASSVAASL 565

  Fly   414 PGQSGLVVGGADGD-----------------------------VFQSET-------LLTPTCQLP 442
            |..:...|..| ||                             :||..|       :..||    
  Fly   566 PPNAVANVAAA-GDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPT---- 625

  Fly   443 GFEPSLAPLAQMCSEAFPFDSVLNGN---GAPAAHVENTRFSALDLDF-------GVDFVSEEAT 497
               |:||...:| ..|....:....|   ||...::...::..:.::.       |.|:.:.|..
  Fly   626 ---PALAAALEM-QRAAAAAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPEQY 686

  Fly   498 PPPPLNDPLTMMEPQPVQLEHYMPPTAPITTK----QKIFIKNV-------------DILKAPQR 545
            .|....|.:..:|.....||.|...|.....|    .|.|:.:|             :.||....
  Fly   687 RPLLTRDKVEFIEQNDEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPQLPRNLCFNCLKMNDS 751

  Fly   546 GTL---HLRTVDELNLMN-----RTEVEHLIVPNLEPMAMT-MMELPPVQQQPMEVTSQLKGPTE 601
            ..|   ||:..:.:||..     |.:...::||..:.:|.. .....||......|.: :..||.
  Fly   752 KALFISHLKKRNCINLFRVLNALRGKTTTVVVPIADDVADDGATGSIPVADAGAGVVA-MNSPTV 815

  Fly   602 TLGEFQPSISESWPSEDGYDLPEDLECWPWMEDAVPEAGL--------------VLPTPSEVAN- 651
            |      :..|......|.:.||.|.....:.:.:.|..|              |....::|.. 
  Fly   816 T------ASGEVVTPGGGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRK 874

  Fly   652 --------------APPLDGLSH-NAVDLLV---------------KDFSHLYAAPPEDTQNAEE 686
                          |.|:|...| |.:|.:|               :...|:|          ::
  Fly   875 DNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVY----------QD 929

  Fly   687 GTAAGGRGTVPPLVPVTSSEGTA-------SVAQSAALGSLPVPPLVPLAAEMNAAIEKPARIYV 744
            .....|.|.|......|.| |.|       |..:.:.||:|.|......:...:||         
  Fly   930 HLGGVGGGAVSDNASTTGS-GMARSNSMEHSPGKRSLLGALGVGSSAEESRSSSAA--------- 984

  Fly   745 ANNLLPAAVDPPLLGGGTSVRGRPYGAKHSGGAASKRKLSLGPNQVPEGGKCLVEGCMFRFKSPV 809
                 |.....|.|.||..|.|   |...|..||:..:.|..                 |..|..
  Fly   985 -----PPLTSTPKLAGGNQVGG---GGSTSASAAAAAQSSAN-----------------RDASAP 1024

  Fly   810 TLEYHGRCHNGSLSSNQPVVCPECKSSNFSNWNCLHTHLWRTHQIDM-ELYSCQLCSFKTPIYSR 873
            ..:|..|         .|.|||.| ...::|:|.:..|:...|...: |.|.|..|....|..|.
  Fly  1025 KSQYFSR---------MPQVCPIC-GQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISY 1079

  Fly   874 LVNTHAKIHSEERN--------------------------------------------------- 887
            |......:|..::|                                                   
  Fly  1080 LREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEE 1144

  Fly   888 ---------------------------YKCEQCGKGFKNTKQLKNHRRLHRTQG----------- 914
                                       .:|..|...|.|...|.||.|.|.|..           
  Fly  1145 EPGSVAKKMRLDDSSNNSSLVGVASQQKECPICNAVFSNNIGLSNHMRSHYTASNAVNAALAAAN 1209

  Fly   915 ------------------LGMGKQSNEQISVGPEGNPVVM------------------------- 936
                              ||:|...:|.....|...|..|                         
  Fly  1210 RMTPKSLTITATPATDSELGVGGTMSESAPATPANVPPAMANQTPQEQAVFRRSLDQAADRRFRR 1274

  Fly   937 HRCEDCGAAFKQKKTLREHLCKERNEQ----LECPECQRRFGSKSSLRLHL--------RSHQEH 989
            .||..|...|..||:.|.|:..:...|    ::|..|...|..:..|::||        :.....
  Fly  1275 MRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMII 1339

  Fly   990 KRFRCDTCDHETSDHNAYRRH-LATHKESKRYSCPHCDFRAIQSTAFRIH--------LQTRHPE 1045
            |:|.||.|....|..:..::| .:.||.:...:....      ||:.:|.        ..|....
  Fly  1340 KQFECDVCSIVYSSESELQQHKRSVHKLTSASASTSA------STSSKIDDDSLMDDGKPTSSDL 1398

  Fly  1046 QELSTII------------YKCNQC--NFTSINQGLLQVHQAKHDAGNHNQTLASSQGDV 1091
            .:|||:.            |:|..|  ||.:..:  |.:|...||..:.|.......|:|
  Fly  1399 ADLSTLAAGGSTASAPLYWYQCKYCPSNFNTNKK--LAIHINSHDEFDSNDYSCKDCGNV 1456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368 6/21 (29%)
C2H2 Zn finger 861..882 CDD:275368 5/20 (25%)
zf-H2C2_2 875..899 CDD:290200 5/101 (5%)
zf-C2H2 888..910 CDD:278523 8/21 (38%)
C2H2 Zn finger 890..910 CDD:275368 8/19 (42%)
zf-C2H2_2 893..999 CDD:289522 36/171 (21%)
C2H2 Zn finger 939..956 CDD:275368 6/16 (38%)
RPB9 966..1061 CDD:224510 26/125 (21%)
C2H2 Zn finger 966..986 CDD:275368 6/27 (22%)
C2H2 Zn finger 994..1014 CDD:275368 5/20 (25%)
C2H2 Zn finger 1022..1042 CDD:275368 3/27 (11%)
C2H2 Zn finger 1055..1075 CDD:275368 6/21 (29%)
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368 6/21 (29%)
C2H2 Zn finger 1067..1088 CDD:275368 5/20 (25%)
C2H2 Zn finger 1279..1298 CDD:275371 6/18 (33%)
C2H2 Zn finger 1308..1325 CDD:275371 4/16 (25%)
C2H2 Zn finger 1420..1440 CDD:275368 6/21 (29%)
C2H2 Zn finger 1450..1468 CDD:275368 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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