DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and hang

DIOPT Version :10

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster


Alignment Length:1425 Identity:258/1425 - (18%)
Similarity:410/1425 - (28%) Gaps:524/1425 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GGFFDEEL------------VIGSGSGSASASAANTTPSGTTLWLADG----GNRSPTEVAVESQ 94
            |||||:.|            .:.:....|:.:||:|..:     :.||    ..|....|.|..:
  Fly   177 GGFFDQHLHQQQQHHQHLENELEAEKEKATPTAASTAAN-----ILDGIHSLKKRKSLTVYVSPK 236

  Fly    95 PNQGIPFVQIHTTDLQQPEKSYRNAFRRRTAEIKS-EELIKSELAEAAAKDRLNATPTPPTRNSS 158
            |.| :...|:....||.|        .|.||.|.| ::.:::.|.:..|....:.:.|..:..|:
  Fly   237 PQQ-MQQHQLQQLQLQPP--------ARMTATISSAQQSLQTLLLQVPASAAASCSSTSTSTTSA 292

  Fly   159 CASVEGKAIIQEGPPLILRCPNCPFLSLCQMRLQQHLSQGNCYMEQHRKQCPGCSNIFYTSDALS 223
            ....|.:.                    .|.|.|.|  |...|...|::|               
  Fly   293 SQQREQQQ--------------------HQQRQQSH--QYRRYHHHHQQQ--------------- 320

  Fly   224 LHLSLDHQMEDSETLALMGRKVT--EAQTKKQTQMSQSQNRP------------------KSRIF 268
                   |.:..:.....|:::.  ..|.::|....|.|.||                  |.:::
  Fly   321 -------QQQQQQQHNQRGKQMLPHHQQHQQQHHRRQRQFRPQRPLPVPVVNPAPTLRKFKPKLY 378

  Fly   269 IKSVDCLREPLPDFP-----PLMPDSG-------SAANILDLLEGVA------------------ 303
            : .:|....|||..|     |.:|..|       .||.:|..:.|||                  
  Fly   379 L-PLDITVPPLPPLPTIPSIPTLPPVGPGSIAPPPAAELLPGISGVAGMVESLSLSLPLDFSQSC 442

  Fly   304 ----------VGASPTEQTMPTAPAANLPAPPPKPIQKISIKSVDVLRETALLP--FDFQLQNHS 356
                      .|...|..|....|.:.:.|.|...:...:..|..|.....|:|  ....:::..
  Fly   443 SSSGHVQHQQAGGLATSTTTSNPPGSVVSATPSASVSASASASASVSTAPLLMPPLPAMPIKDEP 507

  Fly   357 VNTDN-----SLPEVPDVVGEPEKPRQPKIYIRNVDILKEPMVLPSALPGL---GFNSTMPSAAE 413
            ::||:     |:.|..|:|       .|.:::...:...:..:..|.....   |.|::..:|:.
  Fly   508 IDTDDDYQMKSIDESDDMV-------DPTMFLERSEHEGDVPLTASDYDYTAQHGVNASSVAASL 565

  Fly   414 PGQSGLVVGGADGD-----------------------------VFQSET-------LLTPTCQLP 442
            |..:...|..| ||                             :||..|       :..||    
  Fly   566 PPNAVANVAAA-GDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPT---- 625

  Fly   443 GFEPSLAPLAQMCSEAFPFDSVLNGN---GAPAAHVENTRFSALDLDF-------GVDFVSEEAT 497
               |:||...:| ..|....:....|   ||...::...::..:.::.       |.|:.:.|..
  Fly   626 ---PALAAALEM-QRAAAAAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPEQY 686

  Fly   498 PPPPLNDPLTMMEPQPVQLEHYMPPTAPITTK----QKIFIKNV-------------DILKAPQR 545
            .|....|.:..:|.....||.|...|.....|    .|.|:.:|             :.||....
  Fly   687 RPLLTRDKVEFIEQNDEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPQLPRNLCFNCLKMNDS 751

  Fly   546 GTL---HLRTVDELNLMN-----RTEVEHLIVPNLEPMAMT-MMELPPVQQQPMEVTSQLKGPTE 601
            ..|   ||:..:.:||..     |.:...::||..:.:|.. .....||......|.: :..||.
  Fly   752 KALFISHLKKRNCINLFRVLNALRGKTTTVVVPIADDVADDGATGSIPVADAGAGVVA-MNSPTV 815

  Fly   602 TLGEFQPSISESWPSEDGYDLPEDLECWPWMEDAVPEAGL--------------VLPTPSEVAN- 651
            |      :..|......|.:.||.|.....:.:.:.|..|              |....::|.. 
  Fly   816 T------ASGEVVTPGGGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRK 874

  Fly   652 --------------APPLDGLSH-NAVDLLV---------------KDFSHLYAAPPEDTQNAEE 686
                          |.|:|...| |.:|.:|               :...|:|          ::
  Fly   875 DNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVY----------QD 929

  Fly   687 GTAAGGRGTVPPLVPVTSSEGTA-------SVAQSAALGSLPVPPLVPLAAEMNAAIEKPARIYV 744
            .....|.|.|......|.| |.|       |..:.:.||:|.|......:...:||         
  Fly   930 HLGGVGGGAVSDNASTTGS-GMARSNSMEHSPGKRSLLGALGVGSSAEESRSSSAA--------- 984

  Fly   745 ANNLLPAAVDPPLLGGGTSVRGRPYGAKHSGGAASKRKLSLGPNQVPEGGKCLVEGCMFRFKSPV 809
                 |.....|.|.||..|.|   |...|..||:..:.|..                 |..|..
  Fly   985 -----PPLTSTPKLAGGNQVGG---GGSTSASAAAAAQSSAN-----------------RDASAP 1024

  Fly   810 TLEYHGRCHNGSLSSNQPVVCPECKSSNFSNWNCLHTHLWRTHQIDM-ELYSCQLCSFKTPIYSR 873
            ..:|..|         .|.|||.| ...::|:|.:..|:...|...: |.|.|..|....|..|.
  Fly  1025 KSQYFSR---------MPQVCPIC-GQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISY 1079

  Fly   874 LVNTHAKIHSEERN--------------------------------------------------- 887
            |......:|..::|                                                   
  Fly  1080 LREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEE 1144

  Fly   888 ---------------------------YKCEQCGKGFKNTKQLKNHRRLHRTQG----------- 914
                                       .:|..|...|.|...|.||.|.|.|..           
  Fly  1145 EPGSVAKKMRLDDSSNNSSLVGVASQQKECPICNAVFSNNIGLSNHMRSHYTASNAVNAALAAAN 1209

  Fly   915 ------------------LGMGKQSNEQISVGPEGNPVVM------------------------- 936
                              ||:|...:|.....|...|..|                         
  Fly  1210 RMTPKSLTITATPATDSELGVGGTMSESAPATPANVPPAMANQTPQEQAVFRRSLDQAADRRFRR 1274

  Fly   937 HRCEDCGAAFKQKKTLREHLCKERNEQ----LECPECQRRFGSKSSLRLHL--------RSHQEH 989
            .||..|...|..||:.|.|:..:...|    ::|..|...|..:..|::||        :.....
  Fly  1275 MRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMII 1339

  Fly   990 KRFRCDTCDHETSDHNAYRRH-LATHKESKRYSCPHCDFRAIQSTAFRIH--------LQTRHPE 1045
            |:|.||.|....|..:..::| .:.||.:...:....      ||:.:|.        ..|....
  Fly  1340 KQFECDVCSIVYSSESELQQHKRSVHKLTSASASTSA------STSSKIDDDSLMDDGKPTSSDL 1398

  Fly  1046 QELSTII------------YKCNQC--NFTSINQGLLQVHQAKHDAGNHNQTLASSQGDV 1091
            .:|||:.            |:|..|  ||.:..:  |.:|...||..:.|.......|:|
  Fly  1399 ADLSTLAAGGSTASAPLYWYQCKYCPSNFNTNKK--LAIHINSHDEFDSNDYSCKDCGNV 1456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 COG5236 814..>1043 CDD:227561 64/382 (17%)
C2H2 Zn finger 830..852 CDD:275368 6/21 (29%)
C2H2 Zn finger 861..882 CDD:275368 5/20 (25%)
C2H2 Zn finger 890..910 CDD:275368 8/19 (42%)
C2H2 Zn finger 939..956 CDD:275368 6/16 (38%)
C2H2 Zn finger 966..986 CDD:275368 6/27 (22%)
C2H2 Zn finger 994..1014 CDD:275368 5/20 (25%)
C2H2 Zn finger 1022..1042 CDD:275368 3/27 (11%)
C2H2 Zn finger 1055..1075 CDD:275368 6/21 (29%)
hangNP_001138204.1 zf-AD 80..154 CDD:462262
C2H2 Zn finger 1036..1057 CDD:275368 6/21 (29%)
C2H2 Zn finger 1067..1088 CDD:275368 5/20 (25%)
C2H2 Zn finger 1279..1298 CDD:275371 6/18 (33%)
C2H2 Zn finger 1308..1325 CDD:275371 4/16 (25%)
C2H2 Zn finger 1420..1440 CDD:275368 6/21 (29%)
C2H2 Zn finger 1450..1468 CDD:275368 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.

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