DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and Zfp438

DIOPT Version :9

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_001347376.1 Gene:Zfp438 / 240186 MGIID:2444919 Length:798 Species:Mus musculus


Alignment Length:859 Identity:157/859 - (18%)
Similarity:255/859 - (29%) Gaps:322/859 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 NSTMPSAAEPGQSGLVVGGA-DGDVFQSETLLTPTCQLPGFEPSLAPLAQMCSEAFPFDSVLNGN 468
            ||:.....:.|:|.:..|.. .|...||::      |.....|.:.|.. :.|...|..|.::..
Mouse     3 NSSSVPPKDQGESNIRSGTTQSGKTLQSKS------QFRTIAPKVVPKV-LTSRVLPCPSSISDQ 60

  Fly   469 GAPAAHVENTRFSALDLDFGVDFVSEEATPPPPLNDPLTMMEPQPVQLEHYMPPTAPITTKQKIF 533
            |:                                   ||:| |:|:.:     ||          
Mouse    61 GS-----------------------------------LTLM-PKPLGM-----PT---------- 74

  Fly   534 IKNVDILK-APQRGTLHLRTVDELNLMNRTEVEHLIVPNLEPMAMTMMELPPVQQQPMEVTSQLK 597
             :|..::: |.|.||..|                :..||       :....|||:..|.....||
Mouse    75 -QNYALMQVAGQEGTFSL----------------VAFPN-------VASAQPVQKPRMSTHENLK 115

  Fly   598 GPTETLGEFQPSISE--------SWPSEDGYDLP---------EDLECWP--------WMEDAVP 637
            .|   :..:||..|:        |.|.....|.|         ...:.:|        |.:  :|
Mouse   116 LP---IPRYQPLSSQGLRKKQDLSSPKSGSSDPPGPSQLCHLTSSPQAYPDPHHKPSLWKQ--MP 175

  Fly   638 EAGLVLPTPSEVANAPPLDGLSHNAVDLLVKDFS---HLYAAP---PEDTQNAEEGTA----AGG 692
            ...   |:|:.:..|....|:....:..||.:..   .|.|.|   .||:.:.:...|    ||.
Mouse   176 TLN---PSPTNINTATLTSGVGQGDLSPLVTNSCGDLELSAMPVYTTEDSSSQQSLPASMQKAGC 237

  Fly   693 RGTVPPLVPVTSSE------GTASVAQSAAL--------GSLPVPPL------------------ 725
            .....|..|..:||      .:|....|:|:        |.||:.||                  
Mouse   238 ARKEAPTTPAIASEELKEQLASAQTVLSSAVQLLSVVPKGKLPILPLPRVKTTEVGKVESDADNA 302

  Fly   726 --------------VPLAAEMNAAIEKPARIYVANNLLPAAVDP---PLLGGGTSVRGRP-YGAK 772
                          :.:....:||.|..::|...:....:|.:.   |:.....|.:.:| .|.|
Mouse   303 ELSLSGCRANCDERLSITEGFDAATEIASKIAALHGSKQSACESAFCPVTKLDLSHKAKPSSGIK 367

  Fly   773 HSGGAASKRKLSLGPNQV----PEGGKCLVEGCMFRFKSPVTLEYHGRCHNG-SLSSNQPVVC-- 830
            ..|     ||..: |:::    .:..||::                |.|.:| ..:.|.|...  
Mouse   368 RRG-----RKWKV-PDEILALQGKRRKCII----------------GMCGDGIERARNSPQEARD 410

  Fly   831 --PECKSSNFSNW----------------------------------NCLHTHLWRTHQIDMEL- 858
              |...|..:.|.                                  |.|.:....:.|.|... 
Mouse   411 QKPRVASRKYRNIMPKPVLVLSALAPLASHTAVLSQAPSSLGQDVLNNALPSKCLGSKQSDSSTP 475

  Fly   859 -----------------YSCQLCSFKTPIYSRLVNTHAKIHSEERNYKCEQCGKGFKNTKQLKNH 906
                             :.|.:|::.......|:: |...|:..|.|.|..|.|.:.....|..|
Mouse   476 KPSSVLRNGFSGIKKPWHMCPVCNYHFQFKHHLLD-HMNTHTNRRPYSCGICRKTYVRPGSLSAH 539

  Fly   907 RRLHRTQGLGMGKQSNEQISVGPEGNPVVMHRCEDCGAAFKQKKTLREHLCKERNEQLECPECQR 971
            .:||.                 .:.:|..:..||.|...|...:....|| ||.:..:...|   
Mouse   540 MKLHH-----------------GDNHPKKLVCCEFCAKVFGHVRVYFGHL-KEVHRVVISTE--- 583

  Fly   972 RFGSKSSLRLHLRSHQEHKRFRCDTCDHETSDHNAYRRHLATHKESKRYSCPHCDFRAIQSTAFR 1036
              .|.|.|:            ..||..::..|........:..:|:|  |....||  :.:.|..
Mouse   584 --PSPSELQ------------PGDTPKNKNRDPGMQGPDNSLERETK--SSLEEDF--LLNQADE 630

  Fly  1037 IHLQTRHPEQELSTIIYKCNQC-----NFTSINQGLLQVHQAKHDAGNHNQTLASSQGDVPVEKQ 1096
            :.||.|            |.:|     :|..|...||.||..:.........|..|:.|.|.:||
Mouse   631 VKLQIR------------CGRCQITAQSFAEIKFHLLHVHGEEIQGRLQEMILPGSRSDAPHQKQ 683

  Fly  1097 -----SQIKVESNL 1105
                 .|:|..::|
Mouse   684 YTERRKQMKPYASL 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368 5/59 (8%)
C2H2 Zn finger 861..882 CDD:275368 4/20 (20%)
zf-H2C2_2 875..899 CDD:290200 7/23 (30%)
zf-C2H2 888..910 CDD:278523 6/21 (29%)
C2H2 Zn finger 890..910 CDD:275368 5/19 (26%)
zf-C2H2_2 893..999 CDD:289522 21/105 (20%)
C2H2 Zn finger 939..956 CDD:275368 4/16 (25%)
RPB9 966..1061 CDD:224510 18/99 (18%)
C2H2 Zn finger 966..986 CDD:275368 4/19 (21%)
C2H2 Zn finger 994..1014 CDD:275368 3/19 (16%)
C2H2 Zn finger 1022..1042 CDD:275368 5/19 (26%)
C2H2 Zn finger 1055..1075 CDD:275368 8/24 (33%)
Zfp438NP_001347376.1 C2H2 Zn finger 495..515 CDD:275368 4/20 (20%)
zf-H2C2_2 507..532 CDD:372612 8/25 (32%)
zf-C2H2 521..543 CDD:333835 6/21 (29%)
C2H2 Zn finger 523..543 CDD:275368 5/19 (26%)
C2H2 Zn finger 554..573 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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