DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and znf-782

DIOPT Version :9

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_500033.1 Gene:znf-782 / 190310 WormBaseID:WBGene00021931 Length:662 Species:Caenorhabditis elegans


Alignment Length:423 Identity:102/423 - (24%)
Similarity:149/423 - (35%) Gaps:118/423 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   679 EDTQNAEEGTAAGGRGTVPPLVPVTSSEGTASVAQSAALGSLPVPPLVPLAAEMNAAIEKPARIY 743
            |:.:|::..::         ||...|..|::|  .:.:.||.|                      
 Worm    48 EELENSDSASS---------LVSAGSPHGSSS--SNGSHGSSP---------------------- 79

  Fly   744 VANNLLPAAVDPPLLGGGTSVRGRPYGAKHSGGAASKRKLSLGPNQVPEGGKCLVEGCMFRFKSP 808
                  |..|..|..|.|:|  |.|      .|...||.:            |.|.|..|.:.| 
 Worm    80 ------PLQVQSPSQGSGSS--GSP------TGQPEKRHI------------CTVCGKGFSYFS- 117

  Fly   809 VTLEYHGRCHNGSLSSNQPVVCPECKSSNFSNWNCLHTHLWRTHQIDMELYSCQLCSFKTPIYSR 873
             .||.|.|.|.|    .:|..|..|:.: |:....|..| .|||..:.. |.|:.|. ||.....
 Worm   118 -ILESHKRSHTG----EKPYNCHFCQKT-FAQKATLQVH-ERTHTGERP-YKCRYCE-KTFAQYG 173

  Fly   874 LVNTHAK-IHSEERNYKCEQCGKGFKNTKQLKNHRRLHRTQGLGMGKQSNEQISVGPEGNPVVMH 937
            ....|.| .|...|||||.:|.|...:...|..|::.|       |.::               .
 Worm   174 TKTVHEKSAHLGIRNYKCPKCDKLLSSPSALYTHKKTH-------GDKT---------------F 216

  Fly   938 RCEDCGAAFKQKKTLREHLCKERNEQLE----CPECQRRFGSKSSLRLHLRSHQEHKRFRCDTCD 998
            ||:.|...|..|..|:.|: |:.:||.|    |..|.:.|....||::|:|:|...:.:.|..|.
 Worm   217 RCDFCPKTFALKNYLKLHV-KQVHEQNERKHVCVYCNKGFAYAGSLQVHVRTHTGERPYVCKFCP 280

  Fly   999 HETSDHNAYRRHLATHKESKRYSCPHCDFRAIQSTAFRIHLQTR-------HPEQELSTII---- 1052
            ...:.....:.|..||...:.|||..|....||.:....|..|.       :|:...:.|:    
 Worm   281 KAFASQGNLQSHERTHTGERPYSCQFCQRTFIQKSQLTAHESTHLTQKHSVNPDSTTADILPVAG 345

  Fly  1053 ----------YKCNQCNFTSINQGLLQVHQAKH 1075
                      |:|..||........|.:|..||
 Worm   346 SVTDHQMVGNYECTFCNKKYPYASSLYIHMRKH 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368 6/21 (29%)
C2H2 Zn finger 861..882 CDD:275368 6/21 (29%)
zf-H2C2_2 875..899 CDD:290200 10/24 (42%)
zf-C2H2 888..910 CDD:278523 7/21 (33%)
C2H2 Zn finger 890..910 CDD:275368 5/19 (26%)
zf-C2H2_2 893..999 CDD:289522 27/109 (25%)
C2H2 Zn finger 939..956 CDD:275368 5/16 (31%)
RPB9 966..1061 CDD:224510 27/115 (23%)
C2H2 Zn finger 966..986 CDD:275368 7/19 (37%)
C2H2 Zn finger 994..1014 CDD:275368 3/19 (16%)
C2H2 Zn finger 1022..1042 CDD:275368 5/19 (26%)
C2H2 Zn finger 1055..1075 CDD:275368 5/19 (26%)
znf-782NP_500033.1 C2H2 Zn finger 106..126 CDD:275368 9/21 (43%)
zf-H2C2_2 119..143 CDD:290200 10/28 (36%)
C2H2 Zn finger 134..154 CDD:275368 6/21 (29%)
zf-H2C2_2 147..171 CDD:290200 10/26 (38%)
C2H2 Zn finger 162..180 CDD:275368 5/18 (28%)
COG5048 <187..404 CDD:227381 53/215 (25%)
C2H2 Zn finger 191..211 CDD:275370 5/19 (26%)
C2H2 Zn finger 218..239 CDD:275368 7/21 (33%)
C2H2 Zn finger 248..268 CDD:275368 7/19 (37%)
zf-H2C2_2 260..285 CDD:290200 7/24 (29%)
C2H2 Zn finger 276..296 CDD:275368 3/19 (16%)
zf-H2C2_2 288..313 CDD:290200 7/24 (29%)
C2H2 Zn finger 304..324 CDD:275368 5/19 (26%)
C2H2 Zn finger 386..403 CDD:275368
C2H2 Zn finger 424..441 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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