DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and ztf-28

DIOPT Version :9

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_503566.1 Gene:ztf-28 / 185364 WormBaseID:WBGene00018099 Length:272 Species:Caenorhabditis elegans


Alignment Length:138 Identity:34/138 - (24%)
Similarity:50/138 - (36%) Gaps:43/138 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   869 PIYSRLVNTHAK----IHSEERNYK---------CEQCGKGFKNTKQLKNHRRLHRTQGLGMGKQ 920
            |:..|.....|:    :..||...|         |..||:.||:...|..||:|         ..
 Worm     8 PLIDRFETEFAEKSSLLRKEESELKRPDLRGDFLCLSCGQNFKHGASLNRHRKL---------VH 63

  Fly   921 SNEQISVGPEGNPVVMHRCEDCGAAFKQKKTLREHLCKERNEQ-----LECPECQRRFGSKSSLR 980
            |:|             :.|..|......|:|:|:|:   |||.     ..|..|...|.:|.:|.
 Worm    64 SDE-------------YTCMLCARKLYLKETVRDHM---RNEHYLGQVYTCGCCNWTFSNKKALT 112

  Fly   981 LHLRSHQE 988
            .|.::.||
 Worm   113 EHAKAIQE 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368
C2H2 Zn finger 861..882 CDD:275368 3/16 (19%)
zf-H2C2_2 875..899 CDD:290200 8/36 (22%)
zf-C2H2 888..910 CDD:278523 9/30 (30%)
C2H2 Zn finger 890..910 CDD:275368 8/19 (42%)
zf-C2H2_2 893..999 CDD:289522 27/101 (27%)
C2H2 Zn finger 939..956 CDD:275368 5/16 (31%)
RPB9 966..1061 CDD:224510 8/23 (35%)
C2H2 Zn finger 966..986 CDD:275368 6/19 (32%)
C2H2 Zn finger 994..1014 CDD:275368
C2H2 Zn finger 1022..1042 CDD:275368
C2H2 Zn finger 1055..1075 CDD:275368
ztf-28NP_503566.1 COG5236 <14..>114 CDD:227561 29/124 (23%)
C2H2 Zn finger 42..63 CDD:275368 9/29 (31%)
C2H2 Zn finger 69..90 CDD:275368 8/23 (35%)
C2H2 Zn finger 98..114 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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