DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and M03D4.4

DIOPT Version :10

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_001023313.1 Gene:M03D4.4 / 177375 WormBaseID:WBGene00019751 Length:505 Species:Caenorhabditis elegans


Alignment Length:241 Identity:62/241 - (25%)
Similarity:99/241 - (41%) Gaps:44/241 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   859 YSCQLCSFKTPIYSRLVNTHAKIHSEERNYKCEQCGKGFKNTKQLKNHRRLHRTQGLGMGKQSNE 923
            |.|:.|.....: .|.:.||.:|||.|:.:.|.||||.|...:.||.|...|      .|::|  
 Worm    88 YECEDCHEMFAV-KRELATHMRIHSGEQPHSCTQCGKEFGTRQLLKKHWMWH------TGERS-- 143

  Fly   924 QISVGPEGNPVVMHRCEDCGAAFKQKKTLREHL-CKERNEQLECPECQRRFGSKSSLRLHLRSHQ 987
                         |.|..|..||.||..|.:|| ........|||:|.:.|..|..|..|::.||
 Worm   144 -------------HVCPHCNKAFFQKGHLTQHLMIHSGGRPHECPQCHKTFIFKFDLNRHMKIHQ 195

  Fly   988 EHKRFRCDTCDHETSDHNAYRRHLATHKESKRYSCPHCDFRAIQSTAFRIHLQTR---HPEQE-- 1047
            | :.|.|..|............|   |.:.|  ..|....|::.:...:..|::.   .|.||  
 Worm   196 E-RGFSCQQCGRSFLKQVMLDEH---HLKCK--GKPSSPIRSLLTPTMKAGLESAISIKPPQESM 254

  Fly  1048 -LST---------IIYKCNQCNFTSINQGLLQVHQAKHDAGNHNQT 1083
             ||:         ::.:..:.:..::|..|::.|:...:..|:|::
 Worm   255 ILSSETIAKMAQKLLIQQQENHRNALNTLLVKQHENILNNNNNNES 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 COG5236 814..>1043 CDD:227561 52/187 (28%)
C2H2 Zn finger 830..852 CDD:275368
C2H2 Zn finger 861..882 CDD:275368 5/20 (25%)
C2H2 Zn finger 890..910 CDD:275368 9/19 (47%)
C2H2 Zn finger 939..956 CDD:275368 7/16 (44%)
C2H2 Zn finger 966..986 CDD:275368 7/19 (37%)
C2H2 Zn finger 994..1014 CDD:275368 3/19 (16%)
C2H2 Zn finger 1022..1042 CDD:275368 3/19 (16%)
C2H2 Zn finger 1055..1075 CDD:275368 3/19 (16%)
M03D4.4NP_001023313.1 C2H2 Zn finger 90..110 CDD:275368 5/20 (25%)
zf-H2C2_2 102..125 CDD:463886 11/22 (50%)
C2H2 Zn finger 118..138 CDD:275368 9/19 (47%)
C2H2 Zn finger 146..166 CDD:275368 9/19 (47%)
zf-H2C2_2 158..181 CDD:463886 7/22 (32%)
zf-C2H2 172..194 CDD:395048 8/21 (38%)
C2H2 Zn finger 174..194 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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