DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and si:ch211-202h22.10

DIOPT Version :9

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:XP_017212100.2 Gene:si:ch211-202h22.10 / 100002322 ZFINID:ZDB-GENE-110914-121 Length:519 Species:Danio rerio


Alignment Length:324 Identity:95/324 - (29%)
Similarity:138/324 - (42%) Gaps:55/324 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   801 CMFRFKSPVTLEYHGRCHNGSLSSNQPVVCPECKSSNFSNWNCLHTHLWRTHQIDMELYSCQLC- 864
            |..|:|...:||.|.|.|.|    .:|..||:| ...|:...||.:|:  :..|:.:.::|.|| 
Zfish   127 CGKRYKVKQSLESHMRVHTG----EKPFACPQC-GKGFTAKQCLKSHM--SVHIEEKPFNCSLCE 184

  Fly   865 -SFKTPIYSRLVNTHAKIHSEERNYKCEQCGKGFKNTKQLKNHRRLHRTQGLGMGKQSNEQISVG 928
             ||   .:.:.:..|..||..|:.|.|.||||.|...:.|::|.|:|..:               
Zfish   185 MSF---THQQSLKRHMLIHVGEKPYVCRQCGKSFSVKQSLESHIRIHTGE--------------- 231

  Fly   929 PEGNPVVMHRCEDCGAAFKQKKTLREHLCKERN-EQLECPECQRRFGSKSSLRLHLRSHQEHKRF 992
               .|..   |.:||..|..|:.|..|:..... :...||:|.:||..|.||..|:..|...:.|
Zfish   232 ---KPFA---CAECGKGFAVKQNLESHMRVHTGVKPFSCPQCGKRFTVKQSLESHMTIHTGERPF 290

  Fly   993 RCDTCDHETSDHNAYRRHLATHKESKRYSCPHCDFRAIQSTAFRIHLQTRHPEQELSTIIYKCNQ 1057
            .|..||...:..:....|:..|...|.|.||.|.    .|.|.|.||: ||.........:.|::
Zfish   291 TCSMCDKTFTVKHKLEYHMRNHTGEKPYICPQCG----NSYALRNHLE-RHVRIHTGEKPFSCSK 350

  Fly  1058 C--NFTSINQGLLQVHQAKHDAGNHNQT---LASSQGDVPVEKQSQIKVESNLVLAHSSTKVAT 1116
            |  .|| :.|.|      |.....||:|   :.|..|.....|||   :||::.| |:..|..|
Zfish   351 CAKRFT-MKQSL------KSHMRVHNRTKPYICSQCGKRFTVKQS---LESHMSL-HTGEKPFT 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368 7/21 (33%)
C2H2 Zn finger 861..882 CDD:275368 6/22 (27%)
zf-H2C2_2 875..899 CDD:290200 11/23 (48%)
zf-C2H2 888..910 CDD:278523 10/21 (48%)
C2H2 Zn finger 890..910 CDD:275368 9/19 (47%)
zf-C2H2_2 893..999 CDD:289522 29/106 (27%)
C2H2 Zn finger 939..956 CDD:275368 6/16 (38%)
RPB9 966..1061 CDD:224510 30/96 (31%)
C2H2 Zn finger 966..986 CDD:275368 9/19 (47%)
C2H2 Zn finger 994..1014 CDD:275368 4/19 (21%)
C2H2 Zn finger 1022..1042 CDD:275368 8/19 (42%)
C2H2 Zn finger 1055..1075 CDD:275368 6/21 (29%)
si:ch211-202h22.10XP_017212100.2 C2H2 Zn finger 12..32 CDD:275368
COG5048 36..439 CDD:227381 95/324 (29%)
C2H2 Zn finger 40..60 CDD:275368
C2H2 Zn finger 68..88 CDD:275368
C2H2 Zn finger 96..116 CDD:275368
C2H2 Zn finger 124..144 CDD:275368 7/16 (44%)
C2H2 Zn finger 152..172 CDD:275368 7/22 (32%)
C2H2 Zn finger 180..200 CDD:275368 6/22 (27%)
C2H2 Zn finger 208..228 CDD:275368 9/19 (47%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 264..284 CDD:275368 9/19 (47%)
C2H2 Zn finger 292..312 CDD:275368 4/19 (21%)
C2H2 Zn finger 320..340 CDD:275368 10/24 (42%)
C2H2 Zn finger 348..368 CDD:275368 7/26 (27%)
C2H2 Zn finger 376..396 CDD:275368 8/23 (35%)
C2H2 Zn finger 404..424 CDD:275368 95/324 (29%)
C2H2 Zn finger 432..452 CDD:275368
zf-H2C2_2 448..469 CDD:316026
C2H2 Zn finger 460..480 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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