DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1233 and bcl6ab

DIOPT Version :9

Sequence 1:NP_612034.1 Gene:CG1233 / 38063 FlyBaseID:FBgn0035137 Length:1129 Species:Drosophila melanogaster
Sequence 2:XP_005171194.1 Gene:bcl6ab / 100001936 ZFINID:ZDB-GENE-030131-7523 Length:566 Species:Danio rerio


Alignment Length:563 Identity:118/563 - (20%)
Similarity:184/563 - (32%) Gaps:161/563 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 VQLEHYMPPTAPITTKQKIFIKNVDILKAPQRGTLHLRT--VDELNLMNRTEVEHLIVPNLEPMA 576
            :|::|.|.........:.:.:|.........||.|....  ::.||..:.........|||....
Zfish   112 LQMDHVMETCQRFIDSRGLCMKQTRTEMLVNRGCLSSEAPFIEALNPQSSVNFSTYTSPNLHYAV 176

  Fly   577 MTMMELP-------PVQQQPMEVTSQL-KGPTETLGEFQPSISESWPSEDGYDLPEDLECWPWME 633
            .|..|.|       |:..:|...|:.| :.|..|:...|                         :
Zfish   177 STCTENPTRFYRHLPLPLEPSNPTNPLWQIPKTTVIAHQ-------------------------Q 216

  Fly   634 DAVPEAGLVLPTPSEVANAPPLDG-LSHNAVDLLVKDFSHLYAAPPEDTQNAE---------EGT 688
            .::||:|....|   :.||...|| ...|...:|.:      :|..|..:.|.         |..
Zfish   217 HSLPESGTSART---ITNAAVEDGDKERNRPSVLFR------SARAEGNRKAPLLSSEVENIEAC 272

  Fly   689 AAGGRGTVPPLVPVTSSEGTASVAQSAALGSLPV-PPLVPLAAEMNAAIEKPARIYVANNLLPAA 752
            ..||     |..|:.|.....|.|:|:.....|. ||.....|:::.  .|..:..|.|:...::
Zfish   273 HTGG-----PESPLRSDCQPNSPAESSGCSRRPASPPSSITYAKVHN--WKKYKFIVLNSTDNSS 330

  Fly   753 VDPPLLGGGTSVRGRPYGAKHSGGAASKRKLSLGPNQVPEGGKCLVEGCMFRFKSPVTLEYHG-R 816
            :.||    .|........|:|.|          ..|:..:  :|:.:            |.|| .
Zfish   331 LTPP----HTVSESTNQNAEHKG----------QDNRSTD--ECIKK------------EEHGSS 367

  Fly   817 CHN--------GSLSS--NQPVVCPECKS-SNFSNWNCLHTHLWRTHQIDMELYSCQLCSFKTPI 870
            .||        ||.:|  .:.|.|.||:| :....|           ..|.:.|.|..|......
Zfish   368 VHNTFTEESSMGSTNSAERERVYCNECESEAEKPQW-----------LQDGKPYKCDRCQAMFHY 421

  Fly   871 YSRLVNTHAKIHSEERNYKCEQCGKGFKNTKQLKNHRRLHRTQGLGMGKQSNEQISVGPEGNPVV 935
            ....:::|..:|:.|:.|:|..||..|.....||.|.|:|          |.|:           
Zfish   422 KGNPLSSHKSVHTGEKPYRCNVCGAQFNRPANLKTHSRIH----------SGEK----------- 465

  Fly   936 MHRCEDCGAAFKQKKTLREHLCKERNEQLECPECQRRFGSKSSLRLHLRSHQEHKRFRCDTCDHE 1000
            .::||.|.:                           ||...:.||.|:..|...|.:.||.|...
Zfish   466 PYKCETCSS---------------------------RFVQVAHLRAHVLIHTGEKPYPCDICGTR 503

  Fly  1001 TSDHNAYRRHLATHKESKRYSCPHCDFRAIQSTAFRIHLQTRH 1043
            .......:.||..|...|.|.|.:||.|....:..|:||:.:|
Zfish   504 FRHLQTLKSHLRIHTGEKPYHCENCDLRFRHKSQLRLHLRQKH 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1233NP_612034.1 C2H2 Zn finger 830..852 CDD:275368 5/22 (23%)
C2H2 Zn finger 861..882 CDD:275368 3/20 (15%)
zf-H2C2_2 875..899 CDD:290200 8/23 (35%)
zf-C2H2 888..910 CDD:278523 9/21 (43%)
C2H2 Zn finger 890..910 CDD:275368 8/19 (42%)
zf-C2H2_2 893..999 CDD:289522 23/105 (22%)
C2H2 Zn finger 939..956 CDD:275368 3/16 (19%)
RPB9 966..1061 CDD:224510 23/78 (29%)
C2H2 Zn finger 966..986 CDD:275368 5/19 (26%)
C2H2 Zn finger 994..1014 CDD:275368 5/19 (26%)
C2H2 Zn finger 1022..1042 CDD:275368 7/19 (37%)
C2H2 Zn finger 1055..1075 CDD:275368
bcl6abXP_005171194.1 BTB 22..126 CDD:279045 3/13 (23%)
BTB 33..128 CDD:197585 3/15 (20%)
C2H2 Zn finger 412..433 CDD:275368 3/20 (15%)
zf-H2C2_2 426..450 CDD:290200 8/23 (35%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
zf-H2C2_2 453..478 CDD:290200 12/72 (17%)
C2H2 Zn finger 469..489 CDD:275368 8/46 (17%)
zf-H2C2_2 481..506 CDD:290200 8/24 (33%)
C2H2 Zn finger 497..517 CDD:275368 5/19 (26%)
zf-H2C2_2 510..534 CDD:290200 9/23 (39%)
C2H2 Zn finger 525..543 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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