DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc5 and CEF1

DIOPT Version :9

Sequence 1:NP_001163313.1 Gene:Cdc5 / 38062 FlyBaseID:FBgn0265574 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_013940.1 Gene:CEF1 / 855253 SGDID:S000004826 Length:590 Species:Saccharomyces cerevisiae


Alignment Length:811 Identity:223/811 - (27%)
Similarity:331/811 - (40%) Gaps:271/811 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREED 68
            |.:|||||.|.||:||||||.|||.:|||::||||.:|:|:|.:.||.|:|:|.:..||:|:|||
Yeast     6 IYVKGGVWTNVEDQILKAAVQKYGTHQWSKVASLLQKKTARQSELRWNEYLNPKLNFTEFSKEED 70

  Fly    69 EKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKED--GEDTMDDPRKLKPGEIDPN 131
            .:||.||:.:|.||||||.::.|.|..|:|||..||:    .||  |.........||.|:|:||
Yeast    71 AQLLDLARELPNQWRTIADMMARPAQVCVERYNRLLE----SEDSGGAALSTGVTDLKAGDINPN 131

  Fly   132 PETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLATLQKRRELRAAGI 196
            .||:.||||..|::::|.|||:||||||.|||||||.||.||:.|||::|:|.|||||||:.|||
Yeast   132 AETQMARPDNGDLEDEEKEMLAEARARLLNTQGKKATRKIRERMLEESKRIAELQKRRELKQAGI 196

  Fly   197 GSGNRKRIK----GIDYNAEIPFEKRPAHGFYDTSEEHLQ---KNEPDFNKMRQQDLDGELRSEK 254
            ....:|..|    .||||.:|.:|:.|..|.||||.|..|   |.|....|:.::.|||     .
Yeast   197 NVAIKKPKKKYGTDIDYNEDIVYEQAPMPGIYDTSTEDRQIKKKFEQFERKVNRKGLDG-----N 256

  Fly   255 EERERKRDKQKLKQRKENE-VPTAML---QNMEPERKRSKLVLPTPQISDMELQQVVKLGRASEM 315
            :::..|::|.|.::..||| |..|.|   ..:..|.|:.||:|..|                   
Yeast   257 KDKPSKKNKDKKRKHDENEHVEKAALGESTTLTDEYKKPKLILSAP------------------- 302

  Fly   316 AKEIAGESGIETTDALLADYSITPQVAATPRTPAPYTDRIMQEAQNMMALTHTETPLKGGLNTPL 380
                                       .|.:....|..::..:.|.::                 
Yeast   303 ---------------------------GTKQGKVTYKKKLESKRQKLI----------------- 323

  Fly   381 HESDFSGVLPKAASIATPNTVIATPFRTQREGGAATPGGFQTPSSGALVPVKGAGGATGVVNTPA 445
                                                                 ...|||.|.||.
Yeast   324 -----------------------------------------------------EAQATGTVLTPK 335

  Fly   446 YVRDKLSINPEESMGVTETPAHYKNYQKQLKSTLRDGL----STLPAPRNDYEIVVPEQEESERI 506
                  .:.|.:|.......::.|: .|||||.:|..|    ::||:|:||:|||:.|.|:.|..
Yeast   336 ------ELLPHDSGQEDNERSNIKS-GKQLKSRIRKFLVQMFASLPSPKNDFEIVLSEDEKEEDA 393

  Fly   507 ETNSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLTEQQ 571
            |                 :||.|    :|.|..                   |..:|:.|..|..
Yeast   394 E-----------------IAEYE----KEFENE-------------------RAMNEEDNFIEPP 418

  Fly   572 QAEELIKHEMITMQL-YDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKAKQMLTEEMEV 635
            ...:..:..::.:.| |.::  |:|            .||.||...|..:........:.:|..:
Yeast   419 SQNDAPRVSLVAVPLAYSTL--PIP------------EFKNNPQSAIDNKYNLLVANAINKEPHM 469

  Fly   636 VKERMAHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEA 700
            |.|                                      ...|.|:..|.|::    |:.:  
Yeast   470 VPE--------------------------------------DTVDFLKEVESRMQ----HITQ-- 490

  Fly   701 KRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQE--------AIAVP 757
               |:...|::..|.  ....:||::.:|.....|||....|...:.|.:|.        ..::|
Yeast   491 ---GRTSMKIQFKTA--MPPTEVLLESIQSKVESIEQLQRKLQHVQPLEQQNNEMCSTLCHHSLP 550

  Fly   758 RRLE----------SLQEDVRRQMDREKELQ 778
            ..:|          :.::::|....|.|.||
Yeast   551 ALIEGQRKYYADYYAYRQEIRSLEGRRKRLQ 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc5NP_001163313.1 SANT 8..56 CDD:197842 30/47 (64%)
Myb_DNA-bind_6 11..71 CDD:290632 34/59 (58%)
SANT_CDC5_II 56..108 CDD:212557 26/51 (51%)
SANT 60..104 CDD:197842 23/43 (53%)
Myb_Cef 397..648 CDD:288664 49/255 (19%)
CEF1NP_013940.1 REB1 1..491 CDD:227476 204/717 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343758
Domainoid 1 1.000 168 1.000 Domainoid score I795
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002438
OrthoInspector 1 1.000 - - oto98963
orthoMCL 1 0.900 - - OOG6_102607
Panther 1 1.100 - - LDO PTHR45885
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R188
SonicParanoid 1 1.000 - - X1623
TreeFam 1 0.960 - -
1110.730

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