DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc5 and mybl1

DIOPT Version :9

Sequence 1:NP_001163313.1 Gene:Cdc5 / 38062 FlyBaseID:FBgn0265574 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_005162808.1 Gene:mybl1 / 558540 ZFINID:ZDB-GENE-041111-281 Length:743 Species:Danio rerio


Alignment Length:778 Identity:169/778 - (21%)
Similarity:289/778 - (37%) Gaps:244/778 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLA 75
            |...|||.||..|.:.|.:.|..||:....::..||:.||.:.|:|.:.|..|::|||::::.|.
Zfish    37 WSRDEDEKLKKLVEQQGTDNWKLIANYFPTRTDGQCQHRWQKVLNPELVKGPWTKEEDQRVIELV 101

  Fly    76 -KLMPTQWRTIAP-IIGRTAAQCLERYEYLLDQAQRKEDGEDTMDDPRKLKPGEIDPNPETKPAR 138
             |..|.:|..||. :.||...||.||:...|                          |||.|.: 
Zfish   102 HKYGPKRWSVIAKHLQGRIGKQCRERWHNHL--------------------------NPEVKKS- 139

  Fly   139 PDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLATLQK------RRELRAAG-I 196
                ...::|..::.||..||.|       |.|...:|...|...:::.      ||::...| :
Zfish   140 ----SWTQEEDRIIYEAHKRLGN-------RWAEISKLLPGRTDNSIKNHWNSTMRRKVEHEGYL 193

  Fly   197 GSGNRKRIKGIDYNAEIPFEKRPAHGFYDTSEEHLQKNEP-----------DFNKMRQQDLDG-E 249
            ..||:      .||::...:|||...  .|.|....:|:|           .:.....|.|:. .
Zfish   194 QEGNK------SYNSDPGQKKRPKSS--PTVEYPHDQNQPILSGQSQPPRYPYRSQSAQCLENIN 250

  Fly   250 LRSEKEERERKRDKQKLKQRKENEVPTAMLQNMEPERKRS------------KLVLPTPQISDME 302
            :|..........|..|.|:.||.|:   :|.:.|.|.:|.            ...||...:..:|
Zfish   251 VRISSFVSPFHDDPDKEKRIKELEL---LLMSAESEVRRQSGPRNPESYSSWSDSLPDDSVESVE 312

  Fly   303 LQQVVKLGRASEM------AKEIAGESGIETTDALLADYSITPQVAAT-------PRTPAPYTDR 354
             .:.|:.||:..:      :|.:|.|:     .|:|:.....|:.|.|       .|.|..::|.
Zfish   313 -DRGVEDGRSVSIPLPVSPSKFLAAEA-----SAVLSTLETIPEFAETMELIDSVSRDPLAWSDV 371

  Fly   355 I---MQEAQNMMALTH-----TETPLKGGLNTPLHES----------DFSGVLPKAA--SIATPN 399
            .   :.|:......|:     ||| |...:|.|..::          ..||.||...  ..::|.
Zfish   372 TSFDLSESGPSPKPTNPADVCTET-LAFPINAPTVQTMTRPCAAVSQGKSGTLPNTCMNRFSSPP 435

  Fly   400 TVIATPFRTQREGGAATPGGFQTPS-------SGALVPVKG-----------AGG---------- 436
            |.|..  :.:||||..:|...::.|       |....||||           :||          
Zfish   436 TSICR--KKRREGGDQSPAEERSCSYIDNSGNSPKHTPVKGLPFSPSQFFNVSGGEPLSLDNPAL 498

  Fly   437 -ATGV------VNTPAYVRDKLSINPEESMG-------------VTETPAHYKN---YQKQLKST 478
             :|.|      :||| :.::....:.:|:.|             ...||..:||   .|:::...
Zfish   499 TSTPVCGQKCLLNTP-HQKETTPKHQKENAGFRTPKLHKNIVVHTPRTPTPFKNALAAQEKMHGP 562

  Fly   479 LRDGLSTLPAPRNDYEIVVPEQEESERIETNSEPAVEDQADVDARLLAEQEARRKRELEKRSQVI 543
            ||    .:|.|     :.:.|::..|.::.      |..||:..::..:.:.|...::|..::.:
Zfish   563 LR----MVPQP-----LALLEEDIREVLKE------ETGADIFTQVQNQLQYRSYEQMEAPARKV 612

  Fly   544 QRSLPRPTE----VNTKILRPQSEKQNLTEQQQAEELIKHEMITMQLY---------DSVKD--- 592
            ::||...:.    :|.::. ||.:..|.....|::.|:...|:.|.|.         :|:||   
Zfish   613 RKSLVLDSWEKDCLNVQLF-PQQQINNNGTTSQSDGLLTRSMLMMPLTEREENSCSPESLKDSLS 676

  Fly   593 -----------------------PVP----------GQSQHKL---EQLQSYFKANPYEDISQ 619
                                   |.|          |:::.:|   ||.:.|...||...||:
Zfish   677 VVCSVSPQGKRENMIQRSPLYQTPTPANNEWDAVVFGKTEDQLIMTEQARRYLNPNPTACISR 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc5NP_001163313.1 SANT 8..56 CDD:197842 16/44 (36%)
Myb_DNA-bind_6 11..71 CDD:290632 22/59 (37%)
SANT_CDC5_II 56..108 CDD:212557 19/53 (36%)
SANT 60..104 CDD:197842 17/45 (38%)
Myb_Cef 397..648 CDD:288664 64/326 (20%)
mybl1XP_005162808.1 SANT 36..82 CDD:197842 16/44 (36%)
Myb_DNA-bind_6 37..97 CDD:290632 22/59 (37%)
SANT 86..134 CDD:197842 18/73 (25%)
Myb_DNA-binding 86..132 CDD:278669 17/45 (38%)
SANT 138..185 CDD:197842 10/58 (17%)
Myb_DNA-binding 138..183 CDD:278669 10/56 (18%)
LMSTEN 245..287 CDD:285262 11/44 (25%)
Cmyb_C 477..638 CDD:286408 30/177 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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