DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc5 and Myb

DIOPT Version :9

Sequence 1:NP_001163313.1 Gene:Cdc5 / 38062 FlyBaseID:FBgn0265574 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_001185843.1 Gene:Myb / 17863 MGIID:97249 Length:755 Species:Mus musculus


Alignment Length:742 Identity:149/742 - (20%)
Similarity:253/742 - (34%) Gaps:211/742 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLA 75
            |...|||.||..|.:.|.:.|..||:.|..::..||:.||.:.|:|.:.|..|::|||::::.|.
Mouse    43 WTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELV 107

  Fly    76 -KLMPTQWRTIAP-IIGRTAAQCLERYEYLLDQAQRKEDGEDTMDDPRKLKPGEIDPNPETKPAR 138
             |..|.:|..||. :.||...||.||:...|                          |||.|.. 
Mouse   108 QKYGPKRWSVIAKHLKGRIGKQCRERWHNHL--------------------------NPEVKKT- 145

  Fly   139 PDPKDMDEDELEMLSEARARLANTQGKKAK-------------------RKA-REKQLEEARRLA 183
                ...|:|..::.:|..||.|...:.||                   ||. :|..|:|..:.:
Mouse   146 ----SWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQEPSKAS 206

  Fly   184 ------TLQKRRELRAAGIGSGNRKRIKGIDYNAEIPFEKRPAHGFYDTSEEHLQKNEPDFNKMR 242
                  :.||...|...|              :|..|.:..|      :.:..:....|.::...
Mouse   207 QTPVATSFQKNNHLMGFG--------------HASPPSQLSP------SGQSSVNSEYPYYHIAE 251

  Fly   243 QQDLDGEL-----------------RSEKEERERKRDKQKLKQRKENEVPTAMLQNMEPERKRSK 290
            .|::...:                 .:..:......|.:|.|:.||.|:   :|.:.|.|.| .:
Mouse   252 AQNISSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELEL---LLMSTENELK-GQ 312

  Fly   291 LVLPTPQ--------ISDMELQQVVKLGRASEMAKEIAGESGIETTDALLADYSITPQVAATP-R 346
            ..|||..        .|...:.|....|.::.::  ..||.  ..|.:|.||....|:.:|:| |
Mouse   313 QALPTQNHTCSYPGWHSTSIVDQTRPHGDSAPVS--CLGEH--HATPSLPADPGSLPEESASPAR 373

  Fly   347 TPAPYTDRIMQEAQNMMALTHTETPLKGGLNTPLHESDFSGVLPKAASIATPNTVIATPFRTQRE 411
            ....:...|:...:|::....|         ....:||.|             ....:.|....|
Mouse   374 CMIVHQGTILDNVKNLLEFAET---------LQFIDSDSS-------------WCDLSSFEFSEE 416

  Fly   412 GGAATPGGFQTPSSGALVPVKGAGGATGVVNTPAYVRDKLSINPEESMGVTETPAHYKN------ 470
            ..|.:|.  |.|:..|....:..|..|.....|: :|....:..|.|:|.....|.:..      
Mouse   417 AAAFSPS--QQPTGKAFQLQQREGHGTRSAGEPS-LRVTRRVLSEASLGPDSPQARHSKVPLVVL 478

  Fly   471 -------------------YQKQLKSTL-RDGLSTLP-APRNDYEIVVPEQEESERIETNSEPAV 514
                               :...:.||| |..:.:|| :|             |:.:.|:|.   
Mouse   479 RKRRGQASPLAAGEPSPSLFADVISSTLKRSPVKSLPFSP-------------SQFLNTSSN--- 527

  Fly   515 EDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLTEQQ-QAEELIK 578
            .:.:.:||..|........:....|.|.::      |:....|.|..:.|:::.|.. :.....|
Mouse   528 HESSGLDAPTLPSTPLIGHKLTPCRDQTVK------TQKENSIFRTPAIKRSILESSPRTPTPFK 586

  Fly   579 HEMITMQL-YDSVKDPVPGQSQHKLEQLQSYFKAN--------PYEDISQQELAKAKQMLTEEME 634
            |.:...:: |..:| .:|....|.:|.||...|..        .:::.....|.|.||    |:|
Mouse   587 HALAAQEIKYGPLK-MLPQTPSHAVEDLQDVIKQESDESGIVAEFQESGPPLLKKIKQ----EVE 646

  Fly   635 VVKER---------MAHGELPLDVYAQ 652
            ...|:         .|...|...:::|
Mouse   647 SPTEKSGNFFCSNHWAENSLSTQLFSQ 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc5NP_001163313.1 SANT 8..56 CDD:197842 17/44 (39%)
Myb_DNA-bind_6 11..71 CDD:290632 23/59 (39%)
SANT_CDC5_II 56..108 CDD:212557 19/53 (36%)
SANT 60..104 CDD:197842 17/45 (38%)
Myb_Cef 397..648 CDD:288664 54/296 (18%)
MybNP_001185843.1 SANT 40..88 CDD:197842 17/44 (39%)
Myb_DNA-binding 40..86 CDD:278669 16/42 (38%)
Interaction with HIPK2 and NLK. /evidence=ECO:0000269|PubMed:15082531 90..193 31/133 (23%)
SANT 92..140 CDD:197842 18/73 (25%)
Myb_DNA-binding 92..138 CDD:278669 17/45 (38%)
SANT 144..191 CDD:197842 8/51 (16%)
Myb_DNA-binding 144..189 CDD:278669 8/49 (16%)
LMSTEN 269..313 CDD:285262 10/47 (21%)
Transcriptional activation domain. /evidence=ECO:0000250 275..327 13/55 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 337..368 8/34 (24%)
Leucine-zipper 375..396 3/29 (10%)
Cmyb_C 516..677 CDD:286408 34/185 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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