DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc5 and Dmtf1

DIOPT Version :9

Sequence 1:NP_001163313.1 Gene:Cdc5 / 38062 FlyBaseID:FBgn0265574 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_017447870.1 Gene:Dmtf1 / 114485 RGDID:70966 Length:760 Species:Rattus norvegicus


Alignment Length:717 Identity:126/717 - (17%)
Similarity:243/717 - (33%) Gaps:208/717 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKT---------- 61
            |.|:|...|.:||...:.:|.|.:..:.|:.:..:.:|..:..:|..:...:.:.          
  Rat   152 KQGMWSKEEIDILMNNIERYLKARGIKDATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLR 216

  Fly    62 ---------EWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKEDGEDTM 117
                     :::.||.|||..|.......|.||...:||:|:...:|...:.|..   ..|:.|.
  Rat   217 MYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMKDTC---NTGKWTE 278

  Fly   118 DDPRKL----------KPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAR 172
            ::.::|          :||:|...                     ..:.|.:|...|.:::::.|
  Rat   279 EEEKRLAEVVHELTSTEPGDIVTQ---------------------GVSWAAVAERVGTRSEKQCR 322

  Fly   173 EKQLEEARRLATLQKRRELRAAGIGSGNRKRIKGIDYNAEIPFEKRPAHGFYDTSEEHLQKNEPD 237
            .|.|...                    |.|:..|.::..|              .|.:|.....:
  Rat   323 SKWLNYL--------------------NWKQSGGTEWTKE--------------DEINLILRIAE 353

  Fly   238 FNKMRQQDLDGELRSEKEERERKRD---------KQKLKQRKENEVPTAM--LQNMEPERKRSKL 291
            .:...:.|::.:|.:|.....|...         |:::...|:...|..:  |:.:...:|.:.:
  Rat   354 LDVADENDINWDLLAEGWSSVRSPQWLRSKWWTIKRQIANHKDVSFPVLIKGLKQLHENQKNNPV 418

  Fly   292 VLPTPQISDMELQQVVKLGRASEMAKEIAGESGIETTDALLADYSITPQVAA----TPRTPAPYT 352
            :|                        |....||:..::...:...:..:||.    |..:|:|  
  Rat   419 LL------------------------ENKSGSGVPNSNCNSSVQHVQIRVARLEDNTAISPSP-- 457

  Fly   353 DRIMQEAQNMMALTHTETPLKGGLNTPLHESDFSGVLPKAASIATPNTVIATPFRTQREGGAATP 417
               |...|..:.:||..:     .::|....|...:...:.::.|  ..|...|..|..|   ||
  Rat   458 ---MAALQIPVQITHVSS-----TDSPAASVDSETITLNSGTLQT--FEILPSFHLQPTG---TP 509

  Fly   418 GGF--QTPSS-GALVPVKGAGGATGVVNTPAYVRDKLSINPEESMGVTETPAHYKNYQKQLKSTL 479
            |.:  ||.|| |..:.:..:...|.....||        :||:.:....:|.|..|....:....
  Rat   510 GTYLLQTSSSQGLPLTLTTSPTVTLAAAAPA--------SPEQIIVHALSPEHLLNTSDNVTVQC 566

  Fly   480 RDGLSTLPAPRNDYEIVVPEQEESERIETNSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQ 544
            .       .||     |:.:...:|.| |:|....|..||.|  |.:.........||  :....
  Rat   567 H-------TPR-----VIIQTVATEDI-TSSISQAELTADSD--LHSSDFPEPPDALE--ADTFP 614

  Fly   545 RSLPRPTEVNTKILRPQSEKQNLTE--QQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQS 607
            ..:|||    ...::|.....::::  .|.:.||:...|:..:  :.:.|              :
  Rat   615 DEIPRP----KMTIQPSFNNAHVSKYSDQNSTELMNSVMVRTE--EEIAD--------------T 659

  Fly   608 YFKANPYEDISQQELAKAKQMLTEEMEVVKERMAHGELPLDVYAQVWQECLGQVLYLPSQHRYTR 672
            ..|..|..|:       |...:||::|  ...:.|     .|:..:..|   .:|.:||.|.:.:
  Rat   660 DLKQEPPSDL-------ASAYVTEDLE--SPTIVH-----QVHQTIDDE---TILIVPSPHGFIQ 707

  Fly   673 AN 674
            |:
  Rat   708 AS 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc5NP_001163313.1 SANT 8..56 CDD:197842 10/47 (21%)
Myb_DNA-bind_6 11..71 CDD:290632 12/78 (15%)
SANT_CDC5_II 56..108 CDD:212557 14/70 (20%)
SANT 60..104 CDD:197842 13/62 (21%)
Myb_Cef 397..648 CDD:288664 52/255 (20%)
Dmtf1XP_017447870.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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