DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc5 and mybl2

DIOPT Version :9

Sequence 1:NP_001163313.1 Gene:Cdc5 / 38062 FlyBaseID:FBgn0265574 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_002932915.2 Gene:mybl2 / 100126220 XenbaseID:XB-GENE-982419 Length:746 Species:Xenopus tropicalis


Alignment Length:883 Identity:179/883 - (20%)
Similarity:297/883 - (33%) Gaps:303/883 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREE 67
            |:.:|   |...|||.|||.|.|:|:::|..|||.|..::.:||:.||...|.|.:.|..|::||
 Frog    29 RVKVK---WTPEEDETLKALVKKHGQSEWKVIASNLTNRTEQQCQHRWLRVLHPDLVKGPWTKEE 90

  Fly    68 DEKLLHLAKLMPTQ-WRTIA-PIIGRTAAQCLERYEYLLDQAQRKEDGEDTMDDPRKLKPGEIDP 130
            |||::.|.|...|: |..|| .:.||...||.||:...|                          
 Frog    91 DEKVIELVKKYGTKHWTLIAKQLKGRMGKQCRERWHNHL-------------------------- 129

  Fly   131 NPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKR-------------KAREKQLEEARRL 182
            |||.|.:     ...|:|..::.:|...|.|...:.||.             .:..|:..|....
 Frog   130 NPEVKKS-----SWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKVETGGF 189

  Fly   183 ATLQKRRELRAAGIGSGNRKRIKGIDYNAEIPFEKRPAHGFYDTSEE-------------HLQKN 234
            .||:|         ||||:              ::|...| |..:||             ::.:.
 Frog   190 PTLKK---------GSGNQ--------------DEREDSG-YQAAEEQQVLLSETVEMSANIAEE 230

  Fly   235 EPD------FNKMRQQDLDGELRSEKEERERKRDKQKLKQRKENEVPTA-MLQNMEPER---KRS 289
            :|:      .||  .||:..|..||.|:           ...|:..|:| .|::..||:   :..
 Frog   231 QPNILSPKLLNK--SQDIKSEQESEGED-----------STAESVTPSASALEDPGPEKWMVEYV 282

  Fly   290 KLVLPTPQISDMELQQVVKLGRASEMAKEIAGESGIETTDALLADYSITPQVA------------ 342
            ..::|...|.:.:.:...:|............:.| ..|.|::||...||.|.            
 Frog   283 NFLVPGSDIMESDPEAWCELSNFDLGEDSTVSDVG-SPTRAVVADKPQTPNVTEYRLDGHTLSDL 346

  Fly   343 -------------------ATPR----------TPAPYTDR------IMQEAQNMMALTHTETPL 372
                               .||.          |.:|.|:.      .:.||.:|   |...||:
 Frog   347 CKGNKGELIPISPQPQNAFGTPPSLLKHKKRKITLSPVTENGASITTSITEANSM---TPKSTPV 408

  Fly   373 KGGLNTPLHESDFSGVLPKAASIATPN-TVIATPFRTQREGGAATPGGFQTPSSGALVPVKGAGG 436
            |   :.|...|.|.....:..::...| ::.:||..:|:.                         
 Frog   409 K---SLPFSPSQFLNFWSRQDALELENPSLTSTPVCSQKV------------------------- 445

  Fly   437 ATGVVNTPAYVRDKLSINPEESMGVT-----------ETPAHYKNYQKQLKSTLRDGLSTLPAPR 490
               ||.||.: |||..:..:.|:.:|           .||..:||..::..|     |..||.  
 Frog   446 ---VVTTPLH-RDKTPLLQKNSIFITPNHKFVGESVLHTPTPFKNALEKFGS-----LKPLPQ-- 499

  Fly   491 NDYEIVVPEQEESERIETNSEPAVE----DQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPT 551
                  .|..||..:....||..:|    |:..::         |:||:.....:.:::||  ..
 Frog   500 ------TPHLEEDLKEVLRSESGIELIIVDEPKLE---------RQKRKPHSPIKKVRKSL--AL 547

  Fly   552 EVNTKILRPQSEKQNLTEQQQAEELIKHEMITMQLYDSVK-DPVPGQSQHKLEQLQSYFKANPYE 615
            ::..|..:|.|                   :|:....|.: .|..|.|...:...:|...:....
 Frog   548 DIIDKDPKPPS-------------------LTLSSAASTRMQPQTGDSFLSVSLNESSCSSRGEN 593

  Fly   616 DISQQ-------------ELAKAKQMLTEEMEVVKERMAHGE----LPLDVYAQVWQE---CLGQ 660
            .:..|             :|.:..|:.|:..|:||.:...|:    .||......:.:   |...
 Frog   594 SVLNQGFVQVKASKGAVAQLGETSQLATDIGELVKTQCGIGKTETHTPLKTEKGTFPDTDLCPQS 658

  Fly   661 VLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLI 725
            ::.|.:.|   .|.:.|.......||.|.:..              ..|.||             
 Frog   659 LMDLDTFH---SATITSNTHGANKAETRFQVK--------------PDKAKI------------- 693

  Fly   726 KQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESL 763
             |..|.....|..:.:..|..|.|.|:.:.:..:..::
 Frog   694 -QKHDVIKIPEPMTAAWKTVAFGGSQDQLLMQEKARAI 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc5NP_001163313.1 SANT 8..56 CDD:197842 20/47 (43%)
Myb_DNA-bind_6 11..71 CDD:290632 27/59 (46%)
SANT_CDC5_II 56..108 CDD:212557 21/53 (40%)
SANT 60..104 CDD:197842 19/45 (42%)
Myb_Cef 397..648 CDD:288664 51/284 (18%)
mybl2XP_002932915.2 Myb_DNA-bind_6 34..94 CDD:372817 27/59 (46%)
PLN03091 81..>214 CDD:215570 45/187 (24%)
Cmyb_C 413..567 CDD:370427 39/225 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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