DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and fgd4b

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_001332264.7 Gene:fgd4b / 793364 ZFINID:ZDB-GENE-110421-6 Length:775 Species:Danio rerio


Alignment Length:380 Identity:73/380 - (19%)
Similarity:122/380 - (32%) Gaps:125/380 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 LASYTVQSELGDFNALEHQPGYLSGMQLL----CDQTTEAERK--------------VGELHKLH 205
            |..:.:.|||     |:.:..|:|.:.||    |.:.||...|              ||.::..|
Zfish   213 LKLFKISSEL-----LQTERAYVSRLHLLDQVFCVRLTEEALKGSFPVDVVKGIFSNVGSIYTFH 272

  Fly   206 RGQLPADAEYN-----------------------YLEHAKR----LELYGIDLHRATDSNG--KE 241
            ...|..|.|..                       |.|:.|.    :||..:.:.|:|..:.  ::
Zfish   273 SQFLLPDLETRMSQWDSKPRVGDVLAQLAPFLRMYAEYVKNFDSAMELLKLWMERSTQFSAIIQD 337

  Fly   242 LQLGVSAVGLLVFQHSLRVNTFSWSKMVKVSFKRKDFFIQLRREPSENYDTLLGFGMSSHKHAKA 306
            :| .....|.|..||.:....   .::.:.....||:   |::.|.::.|.     ..:.|....
Zfish   338 IQ-SQEVCGSLTLQHHMLEPV---QRVPRYEMLLKDY---LKKLPEDDEDR-----SQAQKSLNI 390

  Fly   307 LWKSCVEHHSFFRLKRPHRLSRFLNI--SLGSKFYYSGRTELQAVQESKQ---RGRIHKVFVRS- 365
            :  |....||...:::...|.:.:.|  .||.        |...|..|.:   .|:|.|:..|: 
Zfish   391 I--SMAATHSNMAIRKMENLKKLMEIYEMLGG--------EEDIVNPSNELIKEGQILKLAARNT 445

  Fly   366 ------------------PSKRLLGAAGGVGTSGSSGGTPMQQHSGSESANSHNNGKPAGAGTIL 412
                              |...|:|....|.|.....|.                       .:|
Zfish   446 SSMERYLFLFNNMLLYCVPKFSLVGQRFTVRTRVRVEGM-----------------------KVL 487

  Fly   413 TITKTSRPHDNKVTSKEADSMPRKAWEQQSDEYDI---QLDVGFIEQCTRRFESA 464
            ..:....||..:|:.||. ::..:|..||..|..|   |..:...:|....|:||
Zfish   488 ETSNEDYPHTFQVSGKER-TLELQASSQQDKEDWIKAFQETIEIFQQKNETFKSA 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 24/117 (21%)
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785 24/117 (21%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 17/95 (18%)
FA 333..369 CDD:285894 10/57 (18%)
PDZ_signaling 502..589 CDD:238492
Y_phosphatase 666..955 CDD:278528
PTPc 668..955 CDD:238006
fgd4bXP_001332264.7 RhoGEF 221..399 CDD:214619 37/196 (19%)
PH1_FDG4 431..524 CDD:275434 21/116 (18%)
FYVE_FGD1_2_4 559..623 CDD:277280
PH2_FGD1-4 645..748 CDD:270056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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