DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and ptpru

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_012812827.1 Gene:ptpru / 733850 XenbaseID:XB-GENE-922688 Length:1439 Species:Xenopus tropicalis


Alignment Length:580 Identity:141/580 - (24%)
Similarity:209/580 - (36%) Gaps:187/580 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   472 AYSSGQHSPILLPTTIADAVGHQQPESG----------SDLITIRLQADEQGRYGFNVKGGVDLS 526
            :|...:..|..||......||..:...|          ..||.::..:..:|....|.       
 Frog   654 SYVGAEIPPTDLPRDTPFIVGDNRSYGGYWNPPLDPRRGYLIYLQAASHHRGETRLNC------- 711

  Fly   527 LPVQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVHGL-----RHEQVVAMIRDCRHQASGE--- 583
              |::::..|...:.|.:......||:.::.|....||     ....|:.::|..|.|.|..   
 Frog   712 --VRIARKAPCKDSQRSSMAPQRSDEMGLVLGICAGGLVVFIILLGAVILIVRKGRTQFSYAYYP 774

  Fly   584 ----LLLTVRPQR----------------SAPLLLEEEP----LYQY-----VPESDEIGSHSNL 619
                |..:..|.|                ..|.||:||.    |:.|     .|....:...|:|
 Frog   775 KPIGLTKSALPSRHENSNCAAPREHTKMTDQPTLLQEEAALAFLHSYNTRVGEPRVGSVTESSSL 839

  Fly   620 LDG-------------------------DALFTQSLLLLSDGLASGALLAQYELMYRKNPDLAIT 659
            |.|                         |.|...:.:.:::|.   ....:||..:.       .
 Frog   840 LGGSPRRGGGRKGSPYHTGQLHPAVRVADLLQHINQMKVAEGY---GFKQEYESFFD-------W 894

  Fly   660 EARKPANAPKNRYRDISP-YDCTRV---SLVNSLTGDYINANYVNMEIPGGAV---NRYIATQGP 717
            :..|..:..|.| :||.| |:..||   .|....:.:.|||||:::.|.....   |.:||||||
 Frog   895 DVSKKKDKGKGR-QDIPPNYERHRVRLHPLQAECSSEEINANYIDIRINREGYHRSNHFIATQGP 958

  Fly   718 LASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWPVTGEEL-----------QLAEGFSVR 771
            ......||||||.||....:||:|.::|.||.||.:|||.|.:..           .||| :|||
 Frog   959 KQDMIYDFWRMVWQEHVSSIVMITKLVEVGRVKCSKYWPDTSDTYGDIRVTLLNTETLAE-YSVR 1022

  Fly   772 CLSEKPDETGSFVFREFVLKDKHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQ 836
            .|:  .:..|..|        :||.:..|   :|:||||.||......|.|..||::        
 Frog  1023 TLT--LERRGYTV--------RHEVKQFH---FLSWPDHGVPYHATGLLAFIRRVKS-------- 1066

  Fly   837 EIEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDETPVSTSVHQCISAANPPVIVHCSA 901
                                               :||.|.               .||:|||||
 Frog  1067 -----------------------------------STPPDA---------------GPVVVHCSA 1081

  Fly   902 GIGRTGVLILMDTALALMEAREPVYPLDIVRTMRDQRACMVQNVSQYRFVCE-----CIC 956
            |.||||..|::|..|.:.|....|...:.|:|:..:|..|||...||.|:.:     |:|
 Frog  1082 GAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMVQTQEQYVFIHDAILEACLC 1141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492 18/98 (18%)
Y_phosphatase 666..955 CDD:278528 94/311 (30%)
PTPc 668..955 CDD:238006 94/309 (30%)
ptpruXP_012812827.1 MAM 27..183 CDD:366209
IG_like 192..278 CDD:214653
fn3 287..366 CDD:365830
fn3 490..568 CDD:365830
PTP_DSP_cys 931..1141 CDD:391942 86/281 (31%)
PTP_DSP_cys 1227..1431 CDD:391942
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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