DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and kalrnb

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_001314918.1 Gene:kalrnb / 678652 ZFINID:ZDB-GENE-060421-7244 Length:2306 Species:Danio rerio


Alignment Length:983 Identity:185/983 - (18%)
Similarity:312/983 - (31%) Gaps:324/983 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LFPQKPGDVVRWVDAQKQFKKQCSSVSLDNDAVPLLEFRVKFFVSDPSRLQEEFTRYQFYLQIKR 142
            :|.||.   .:::.:.:.:.|.|..|.|     |.:...::..:.:...|.|:.|.....:..|.
Zfish   422 VFHQKS---EQFLSSMEGWVKSCGEVGL-----PTVTQELELAIHNHQNLYEQVTTAYTEVSQKG 478

  Fly   143 NILLGKL-----PCSSNTQCLLASYT--VQSELGDFNALEHQPGYLSGMQLLCDQTTEAERKVGE 200
            ..||..|     |..|.:....|.|:  |:..|...:.:.||...|.|:.              :
Zfish   479 KTLLDVLQRPPPPADSGSLTAGADYSQAVRGVLEVVHEVVHQYRRLEGLL--------------Q 529

  Fly   201 LHKLHRGQLPADAEYNYLEHAKRLEL--YGIDLHRATD---SNGKELQLGVSAVGLLVFQ-HSLR 259
            .|||...|              ||:|  :..|:.:..|   ::|:......:.||..|.: .:|:
Zfish   530 HHKLRLHQ--------------RLQLCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSVHRARALQ 580

  Fly   260 VNTFSWSKMVKVSFKRKDFFIQLRR--------EPSENY--------------------DTLLGF 296
            .....:.::.:.::...|..::...        :|.|.|                    ..||..
Zfish   581 KRHDDFQEVAQNTYTNADKLLEAAEQLAQTGECDPEEIYAAAHHLEVRVQEFVRRVEQRKLLLDI 645

  Fly   297 GMSSHKHAKALW-------KSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGRTELQAVQESKQ 354
            .:|.|.|.|.||       ||.||.                         ......:.||||   
Zfish   646 SVSFHTHTKELWSWMEDLQKSLVEP-------------------------VVNSESVDAVQE--- 682

  Fly   355 RGRIHKVFVRSPSKRLLGAAGGVGTSGSSGGTPMQQHSGSESANSHNNGKPAGAGTILTITKTSR 419
               :.:.|.:..|..|......:     ..|..:.||. .:||.:.|                ..
Zfish   683 ---LIRQFQQQQSSTLDATLNVI-----KEGEELIQHL-RDSALACN----------------KL 722

  Fly   420 PHDNKVTS--------KEADSMPRKAWEQQSDEYDIQLDVGFIEQ----CTRRFESASPSPMPPA 472
            ||.:.|..        .||.:...:.:.::..:.||.|.:...||    .....::.....|..|
Zfish   723 PHASSVAHIEGVLQQLDEAQAHMEELFHERRIKLDIFLQLRIFEQYALEVMGELDAWKQDLMRQA 787

  Fly   473 YSSGQHSPILLPTTIADAVGHQQPESGSDLITIRLQADEQGR-----------YGFNVKGGVDLS 526
            .......     .|:|:...|:..|....:..:..:..:||:           .|..:.|..|:.
Zfish   788 TDFNTEE-----LTLAEQRLHRHTERKLAMNNMTYEVIQQGQDLHQYIMEVQASGMELTGEKDVD 847

  Fly   527 LPVQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVH-------GLRH-----EQVVAMIRDCRHQ 579
            |..:|.:::..         :.|....|.::....|       .|||     :||:..||     
Zfish   848 LAAKVQELLEF---------LNEKQHELEVSAEHTHKRLEQCLQLRHLQAEVKQVLGWIR----- 898

  Fly   580 ASGELLLTVRPQRSAPL-----LLEEEPLYQYVPES----DEI-GSHSNLL-------------- 620
             :||.:||.....:.||     |..|...:|...||    |.: .:|.:.|              
Zfish   899 -NGESMLTASTTNAGPLSEVEQLQREHEQFQLAIESLLHADSLQRTHQSALQLQQRAELLLQAGH 962

  Fly   621 -DGD---------ALFTQSLLL-LSDGL----ASGA----------LLAQYELMYRKNPD----- 655
             |.|         ||..|:|:| :.|.|    ||.|          :|...||.||:..|     
Zfish   963 YDPDAVRACAETVALHWQTLMLKMEDRLKLVNASVAFYKTSEQVCNVLESLELEYRREEDWCGGH 1027

  Fly   656 -----LAITEARKPANAPKNRYRDISPYDCTRVSLVNSLTGDYINANYVNMEIPGGAVNRYIATQ 715
                 .|.|:...|........::.....||.......:...||:.|.|:|.   |.|....||:
Zfish  1028 DKLGSTAETDHVSPLINKHLEQKEAFLKACTLARRNAEVFLKYIHRNNVSMP---GVVTHNRATE 1089

  Fly   716 GPLASTTTD----------FWRMVQQE----------SSHLLVMLTTVMESGRQ--KCHQYWPVT 758
            ..:.:..::          ||.|.::.          ..|....:..:.|:|..  ..|.....|
Zfish  1090 SQVKAILSELLQRENRVLHFWTMKKRRLDQCQQYVLFERHAKQAIDWLQETGEYFLSTHTSSGET 1154

  Fly   759 GEELQ--LAEGFSVRCLSEKPDE--------TGSFVFREFVLKDKHEQRHIHHMQYLAWPDHCVP 813
            .|:.|  |.|....|..:::..|        .||.|          |:.|:|..:...|    |.
Zfish  1155 SEKAQELLKEYEDFRVSAKQTQEKVKLLIQLAGSLV----------EKGHVHVTELKRW----VS 1205

  Fly   814 SDPNLFLEFTERV---RAARNRTL-----------LQEIEESL----KQVRLMDADADADENGGL 860
            :....:.:|:.|:   |.:.:|.|           |..|..:|    .:|.|.|.|.:.:|    
Zfish  1206 TVDRRYRDFSMRMGHYRCSLDRALGVCSEDNKDLELDIIPANLTHTDPEVNLNDPDHEVNE---- 1266

  Fly   861 MRERKCAA 868
              |:|.:|
Zfish  1267 --EKKKSA 1272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 33/162 (20%)
FERM_N 38..102 CDD:286467 5/23 (22%)
FERM_M 125..232 CDD:278785 25/115 (22%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 24/134 (18%)
FA 333..369 CDD:285894 6/35 (17%)
PDZ_signaling 502..589 CDD:238492 21/109 (19%)
Y_phosphatase 666..955 CDD:278528 49/253 (19%)
PTPc 668..955 CDD:238006 49/251 (20%)
kalrnbNP_001314918.1 SEC14 46..184 CDD:214706
SPEC 197..413 CDD:238103
SPEC 540..757 CDD:238103 42/269 (16%)
SPEC 882..1120 CDD:238103 56/246 (23%)
SPEC 1126..1214 CDD:197544 19/101 (19%)
RhoGEF 1277..1446 CDD:238091
PH1_Kalirin_Trio_like 1453..1575 CDD:270060
PH 1486..1571 CDD:278594
SH3_Kalirin_1 1641..1700 CDD:212786
SH3-RhoG_link 1697..>1864 CDD:293215
RhoGEF 1886..2056 CDD:279015
PH2_Kalirin_Trio_p63RhoGEF 2060..2193 CDD:270061
PH 2083..2178 CDD:278594
SH3 2246..2302 CDD:302595
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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