DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and Epb41l1

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_067713.2 Gene:Epb41l1 / 59317 RGDID:71087 Length:1551 Species:Rattus norvegicus


Alignment Length:1081 Identity:280/1081 - (25%)
Similarity:421/1081 - (38%) Gaps:324/1081 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ARDKKTPQ------RQQCVTVLFLDDITHTFRIEKRAKGSELLDQVFQYLELSERDYFGLLF--- 79
            ::.:|:||      :.....|..||...:...:||..:|..|.|.|.::|.|.|:|||||.|   
  Rat    81 SKAQKSPQKIAKKFKSATCRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDA 145

  Fly    80 -PQKPGDVVRWVDAQKQFKKQCSSVSLDNDAVPLLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRN 143
             .||     .|:|..|:.|||..|...:      ..|.|||:..||::|.|:.|||...||::.:
  Rat   146 DSQK-----NWLDPSKEIKKQIRSSPWN------FAFTVKFYPPDPAQLTEDITRYYLCLQLRAD 199

  Fly   144 ILLGKLPCSSNTQCLLASYTVQSELGDFNALEHQPGYLSGMQLLCDQTTEAERKVGELHKLHRGQ 208
            |:.|:||||..|..||.||.||:||||.:..||...|:|.::...:||.|.|.::.||||.:||.
  Rat   200 IITGRLPCSFVTHALLGSYAVQAELGDHDTEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGM 264

  Fly   209 LPADAEYNYLEHAKRLELYGIDLHRATDSNGKELQLGVSAVGLLVFQHSLRVNTFSWSKMVKVSF 273
            .|.:||.::||:||:|.:||:|||.|.||.|.::.|||.|.|||:::..||:|.|:|.|::|:|:
  Rat   265 TPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISY 329

  Fly   274 KRKDFFIQLRREPSENYDTLLGFGMSSHKHAKALWKSCVEHHSFFRLKRPHRLSR-FLNISLGSK 337
            ||.:|:|::|....|.:::.:||.:.:|:.||.|||.|:|||:||||..|....: ||  .:|||
  Rat   330 KRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFL--VMGSK 392

  Fly   338 FYYSGRTELQAVQESKQRGRIHKVFVRSPSKRLLGAAGGVGTSGSSGGTPMQQHSG-------SE 395
            |.|||||:.|..|.|....|....|.||.|||...:....|...|...:..:.|..       .:
  Rat   393 FRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGAEFSRPASVSENHDAGPDGDKRED 457

  Fly   396 SANSHNNGKPAGAGTILTITKTSRPHDNKVTSKEADSMPRKAWEQQSDEYDI----QLDVGFIEQ 456
            .|.|......|..|.:.|.||.      |....|.::.||...|......|:    |..:..:::
  Rat   458 DAESGGRRSEAEEGEVRTPTKI------KELKPEQETTPRHKQEFLDKPEDVLLKHQASINELKR 516

  Fly   457 C-----------------TRRFES--ASPSP--MPPAYSSGQH-----SPILLPTT--------- 486
            .                 .||..|  |||||  .|...|..|.     ...|:|.|         
  Rat   517 TLKEPNSKLIHRDRDWERERRLPSSPASPSPKGTPEKASEAQRIQDTSRQDLVPGTATGLEMFTQ 581

  Fly   487 ---------------------------IADAVGHQQPESGSDLI--------------------- 503
                                       :......|:.||||.|.                     
  Rat   582 KSLAASPEGSEHWVFIERVYTRPEDLGLLTVAATQRKESGSSLSGILADGRLSKVDILVDKFKVE 646

  Fly   504 --------TIRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADR-------CTPRVCEGDEV 553
                    |.|....:||:.         |:.|.....|   ...||       .|.::.||..:
  Rat   647 VATEETVRTRRTSTQQQGKM---------LASPEDFETV---REEDRGGPGEATSTDKLPEGSRL 699

  Fly   554 LMINGRDVHGLRHEQVVAMIRDC--RHQASGELLLTVRPQRSAPLLLEEEPLYQYVPESDEIGSH 616
            .:.|    ||:.:.|:.:.:...  |.|..|      ||..:....::.|.|   .|.||:.|..
  Rat   700 KLRN----HGVSNGQLESQVEWGLERPQTWG------RPTAAGLGPVQGEVL---SPTSDKGGLQ 751

  Fly   617 SNLLD-------------GDALFTQSLLLLSDGL--ASGALLAQYELMYRKNPDLAITEARKPAN 666
            |.|||             .|..|.:....|..|.  :...|||                   |.:
  Rat   752 SFLLDPAQAEARADSSDETDTSFAERSFCLHYGEKDSEDQLLA-------------------PPS 797

  Fly   667 APKNRYRDISPYDCTRVSLVNSLTGDY-INANYVNMEIPGGAVNRYIATQGPLASTTTDFWRMVQ 730
            ..:..:.|..|.|.|.:.|....|.:: :.::......||.:.::..|.:.|.|.   :.|    
  Rat   798 EHREEHPDALPGDGTWLELAGVHTENWELKSSDPRASAPGSSQHKDQAHKAPSAE---EAW---- 855

  Fly   731 QESSHLLVMLTTVMESGR----------QKCHQYWPVTGEELQLAEGFSVRCLSEKPDETGSFVF 785
                       |..:.||          |...:.|..|.:.|   ||..|:.|:.          
  Rat   856 -----------TPRDHGRPDDPQGAAVGQTFEEVWENTQQRL---EGELVQPLAS---------- 896

  Fly   786 REFVLKDKHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNR-----------------T 833
               |.:|:                  ||::.: ::..||:...||.:                 .
  Rat   897 ---VAEDE------------------VPTNMD-WMGKTEKSPPARRKKSPPGRGGGVHLDAQACA 939

  Fly   834 LLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDE-------TPVSTSVHQCISAA 891
            ||:.|...:::      .|..|:...|.:|:...:.....||.|       .|||:         
  Rat   940 LLRTIPPCVRK------PARPDQGSFLPKEKGTVSPPAVEPETEDRETVSPLPVSS--------- 989

  Fly   892 NPPVIVHCSAGIGRTGVLILMD-TALALM--------EARE 923
                        |.|.||..|: |:|:.:        |:||
  Rat   990 ------------GHTEVLAAMEGTSLSPLPPGSRGPSESRE 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 82/200 (41%)
FERM_N 38..102 CDD:286467 26/67 (39%)
FERM_M 125..232 CDD:278785 49/106 (46%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 44/93 (47%)
FA 333..369 CDD:285894 17/35 (49%)
PDZ_signaling 502..589 CDD:238492 20/124 (16%)
Y_phosphatase 666..955 CDD:278528 54/302 (18%)
PTPc 668..955 CDD:238006 54/300 (18%)
Epb41l1NP_067713.2 B41 98..288 CDD:214604 82/200 (41%)
FERM_C_4_1_family 283..376 CDD:270005 44/92 (48%)
FA 385..428 CDD:400882 21/44 (48%)
SAB 493..>524 CDD:398195 3/30 (10%)
4_1_CTD 1414..1538 CDD:399118
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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