DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and PTPN13

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_011530467.1 Gene:PTPN13 / 5783 HGNCID:9646 Length:2507 Species:Homo sapiens


Alignment Length:1007 Identity:217/1007 - (21%)
Similarity:358/1007 - (35%) Gaps:317/1007 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SELLDQVFQYLEL--SERDYFGLLF--PQK---------------PGDVVRWVDAQKQFKKQCSS 102
            |.::.|...:.|.  |:.|....:|  |||               |.|:......|.| .:..||
Human  1689 SNMVSQAQSHHEAPKSQEDTICTMFYYPQKIPNKPEFEDSNPSPLPPDMAPGQSYQPQ-SESASS 1752

  Fly   103 VSLDNDAVPLLEFRVKFFVSDPSRLQEEFTRYQ---------FYLQIKRNILLGKLPCSSNTQCL 158
            .|:|...:        ..:|:|:| ||.:|..:         |.|:::..|.|            
Human  1753 SSMDKYHI--------HHISEPTR-QENWTPLKNDLENHLEDFELEVELLITL------------ 1796

  Fly   159 LASYTVQSELGDFNALEHQPGYLSGMQLLCDQTTEAERKVG-ELHKLHRGQLPADAEYNYLEHAK 222
                 ::||.|..       |:         ..|:..:::| .:|.:.  |.||.::.......:
Human  1797 -----IKSEKGSL-------GF---------TVTKGNQRIGCYVHDVI--QDPAKSDGRLKPGDR 1838

  Fly   223 RLELYGIDLHRATDSNGKELQLGVSAVGLLVFQHSLRVNTFSWSKMVKVSFKRKDFFIQLRREPS 287
            .:::...|:...|.::...|....|....||....|.:     .::..:.....|..:...:|. 
Human  1839 LIKVNDTDVTNMTHTDAVNLLRAASKTVRLVIGRVLEL-----PRIPMLPHLLPDITLTCNKEE- 1897

  Fly   288 ENYDTLLGFGMSSHKHAKALWKSCVEHHSFFRLK-----RP------------------------ 323
                  |||.:            |..|.|.:::.     .|                        
Human  1898 ------LGFSL------------CGGHDSLYQVVYISDINPRSVAAIEGNLQLLDVIHYVNGVST 1944

  Fly   324 -----HRLSRFLNISLGSKFYYSGRTELQAVQESKQRGRIHKVFVRSPSKRLLGAAGGVGTSGSS 383
                 ..::|.|::||.|....:.|.:|..|..||:..      |.:|.......:..||:....
Human  1945 QGMTLEEVNRALDMSLPSLVLKATRNDLPVVPSSKRSA------VSAPKSTKGNGSYSVGSCSQP 2003

  Fly   384 GGTPMQQHS--GSESAN--SHNNGKPA-----GAGTILTITKTSRPHDNKVTSKEADSMPRKAWE 439
            ..||....|  ..|..|  |:..||.:     |:.. ||:.|.|.|:.:...||..::  .:::.
Human  2004 ALTPNDSFSTVAGEEINEISYPKGKCSTYQIKGSPN-LTLPKGSFPNQSSNYSKCPNN--SESYI 2065

  Fly   440 QQSDEYDIQLDVGFIEQCTRRFESASPSPMPPAYSSGQHSPILLPTTIADAVGHQQPESGSDLIT 504
            |:.|.||...:...|:                              ::.|.|    .|...:|: 
Human  2066 QEDDIYDDSQEAEVIQ------------------------------SLLDVV----DEEAQNLL- 2095

  Fly   505 IRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEGD-------EVLMINGRDVH 562
                 :|....|::...|. |.:..::|:       :|.....|:|.       |...:||.:.:
Human  2096 -----NENNAAGYSCGPGT-LKMNGKLSE-------ERTEDTDCDGSPLPEYFTEATKMNGCEEY 2147

  Fly   563 GLRHEQVVAMIRDCRHQASGELLLTVRPQRSAPLLLEEEPL--------YQYVPESDEIGSHSNL 619
                         |..:...|.|:. :||...   .:::.:        .:.....|....||.|
Human  2148 -------------CEEKVKSESLIQ-KPQEKK---TDDDEITWGNDELPIERTNHEDSDKDHSFL 2195

  Fly   620 LDGDALFTQSLLLLSDGLASGALLAQYELMYR-------KNPDLAITEARKP----------ANA 667
            .:.:......:.:|..|..:||.|.....:.|       .:.:|...:..||          .|.
Human  2196 TNDELAVLPVVKVLPSGKYTGANLKSVIRVLRGLLDQGIPSKELENLQELKPLDQCLIGQTKENR 2260

  Fly   668 PKNRYRDISPYDCTRVSLVNSLTGDYINANYVNMEIPGGAVN-RYIATQGPLASTTTDFWRMVQQ 731
            .||||::|.|||.|||.|.:.  |.||||:::  :||.|... .|||.||||.:|..|||:|:.:
Human  2261 RKNRYKNILPYDATRVPLGDE--GGYINASFI--KIPVGKEEFVYIACQGPLPTTVGDFWQMIWE 2321

  Fly   732 ESSHLLVMLTTVMESGRQKCHQYWP-VTGEELQLAEGFSVRCLSEKPDETGSFVFREFVLKD--K 793
            :.|.::.|:|..:|..:.||.:||| :.|:...::.  .:|....:..:...||.|...|:|  .
Human  2322 QKSTVIAMMTQEVEGEKIKCQRYWPNILGKTTMVSN--RLRLALVRMQQLKGFVVRAMTLEDIQT 2384

  Fly   794 HEQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADADADENG 858
            .|.|||.|:.:.|||||..||.|:..|.|...:|                               
Human  2385 REVRHISHLNFTAWPDHDTPSQPDDLLTFISYMR------------------------------- 2418

  Fly   859 GLMRERKCAASNGATPEDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALMEARE 923
                                    .:|:     :.|:|.||||||||:|.||.:|..|.|:....
Human  2419 ------------------------HIHR-----SGPIITHCSAGIGRSGTLICIDVVLGLISQDL 2454

  Fly   924 PVYPLDIVRTMRDQRACMVQNVSQYRFVCECI 955
            .....|:||.||.||..|||...||.|..:.|
Human  2455 DFDISDLVRCMRLQRHGMVQTEDQYIFCYQVI 2486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 38/203 (19%)
FERM_N 38..102 CDD:286467 13/63 (21%)
FERM_M 125..232 CDD:278785 19/116 (16%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 15/93 (16%)
FA 333..369 CDD:285894 10/35 (29%)
PDZ_signaling 502..589 CDD:238492 15/93 (16%)
Y_phosphatase 666..955 CDD:278528 95/292 (33%)
PTPc 668..955 CDD:238006 94/290 (32%)
PTPN13XP_011530467.1 KIND 3..190 CDD:214801
B41 573..781 CDD:214604
FERM_N 576..638 CDD:286467
FERM_M 668..781 CDD:278785
PH-like 777..877 CDD:302622
PDZ_signaling 1091..1175 CDD:238492
PTN13_u3 1177..1367 CDD:293207
PDZ_signaling 1366..1455 CDD:238492
PDZ 1503..1594 CDD:214570
PDZ_signaling 1791..1870 CDD:238492 17/113 (15%)
PDZ_signaling 1888..1966 CDD:238492 14/96 (15%)
PTPc 2236..2488 CDD:214550 99/317 (31%)
PTPc 2262..2488 CDD:238006 95/291 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0792
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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