DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and frmpd2

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_021335879.1 Gene:frmpd2 / 571843 ZFINID:ZDB-GENE-110315-2 Length:1116 Species:Danio rerio


Alignment Length:1043 Identity:214/1043 - (20%)
Similarity:350/1043 - (33%) Gaps:351/1043 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FRLNNLTRTFRLRGGGPELAR------------------DKKTPQRQQCVTVLFLDDITHTFRIE 51
            |.||..    :::..|||..|                  ..|:...|:.:|||..:......:.:
Zfish   260 FSLNER----KMKDTGPEFIRMLEEPLVVLELPNSIVSNKGKSSSNQRDLTVLMPNGQNVLLKCD 320

  Fly    52 KRAKGSELLDQVFQYLELSERDYFGLLFPQKPGDVVRWVDAQKQFKKQCSSVSLDNDA------- 109
            .:.:|.:..|.:..:..|.|..||||.:.         .|.:..|        ||||.       
Zfish   321 VKCRGRDAFDMIVAHTNLVEHFYFGLAYS---------YDNEFFF--------LDNDTKISKVAP 368

  Fly   110 -----VP----LLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRNILLGKLPCSSNTQCLLASYTVQ 165
                 ||    :|.||:|:||||.|.|..:|||:|||||::|::|..:|.|:..|...|.:..:|
Zfish   369 GDWKKVPTATFVLHFRIKYFVSDVSLLLNKFTRHQFYLQLRRDLLDDRLQCNEETCLFLGALALQ 433

  Fly   166 SELGD-----FNALEHQPGY------LSGMQLLCDQTTEAERKVGELHKLHRGQLPADAEYNYLE 219
            :|.||     :....:||.:      :..|.:.|     .:.::..||..:......:||..:|:
Zfish   434 AEFGDSLPEVYGKNYYQPEHYVSKSVVQKMAMPC-----LKEELLRLHVNNANMSAEEAELEFLK 493

  Fly   220 HAKRLELYGIDLHRATDSNGK---ELQLGVSAVGLLVFQ--HSLRVN--TFSWSKMVKVSFKRKD 277
            ..::|..||:..||.......   ||.|||.|..:.|::  ::.|..  ||.|.....::..|:.
Zfish   494 SVQQLPEYGVLFHRVAREKKPVFGELLLGVCAKCITVYEVINNCRTASLTFHWRDTSSITSTRRK 558

  Fly   278 FFIQLRREPSENYDTLLGFGMSSHKHAKALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSG 342
            |.|:......::.     |.....|.||.|...|...|.|.:    ...||.|..||.|      
Zfish   559 FIIECSTSKKKHV-----FLTEKSKVAKYLCDLCSAQHKFHK----EMSSRQLTHSLAS------ 608

  Fly   343 RTELQAVQESKQRGRIHKVFVRSPSKRLLGAAGGVGTSGSSGGTPMQQHSGSESANSHNNGKPAG 407
                   :||                                                       
Zfish   609 -------EES------------------------------------------------------- 611

  Fly   408 AGTILTITKTSRPHDNKVTSKEADSMPRKAWEQQSD--EYDIQLDVGFIEQCTRRFESASPSPMP 470
               |:......|..:|:|....||....|..|..:.  |..|:|....::               
Zfish   612 ---IVQYAALCRAQNNEVNDSSADESMSKLCEDIATRIEAKIKLQRDLLD--------------- 658

  Fly   471 PAYSSGQHSPIL----------------LPTTIADA-VGHQQPESGSDLITIRLQADEQGRYGFN 518
               ::|..||||                :.:.:.|. .|.:.||  .::|.:.|:.|.:...|..
Zfish   659 ---NTGSQSPILQRSLCSTPKRGSDVPSVSSPLRDTPTGARTPE--REIICVSLKKDPKVGLGIV 718

  Fly   519 VKG---GVDLSLPVQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVHGLRHEQVVAMIRDCRHQA 580
            :.|   ...|.|.:.::.|||.:|||| ..|:..|..::.:|...:.|:...:...:::...:..
Zfish   719 IVGEDTAGKLDLGIFIASVVPGSPADR-DGRIKPGGRLISLNQLSLEGMSFSEAADIMQSSSNDV 782

  Fly   581 SGELLLT---VRPQRSAPLLLEEEPLYQYVPESDEIGSHSNLL----DGDALFTQSLLLLSDGLA 638
              ||:::   .:.:|...:.|.|.. |:         |.|.:|    .||....:.:.::....|
Zfish   783 --ELIISQPKAQCKRGGSVSLNERS-YE---------SQSTILADGRTGDEFLDELVSVMMTPKA 835

  Fly   639 SGALLAQYELMYRKNPDLAITEARKPANAPKNRYRDIS-----PYDCTRVSLVNS---------- 688
            |..|..         |::.|      .||..:..|..|     |.:.| |:|:.|          
Zfish   836 SNRLHV---------PEVRI------INAQDDYSRSASLISLRPEEFT-VTLMKSGGSLGISIAG 884

  Fly   689 --LTGDYINANYVNMEIPGGAV---------NRYIATQGPLASTTTDFWRMVQQESSHLLV---- 738
              .||......|:...:.||..         :|.:...|......||      |:::..|.    
Zfish   885 GVNTGLRYGGIYIKSLVSGGVAEQDGRIQTGDRLLEVDGIRLQGFTD------QQAAECLARTGE 943

  Fly   739 MLTTVMESGRQKCHQYWPVTGEELQLAEGFSVRCLSEKPDETGS---------FVFREFVLKDKH 794
            ::..|:|.......|..|.:.   ||....|: |   .|...|:         .:.|.|.:|.: 
Zfish   944 VVGLVLERDGGSMLQQGPGSP---QLRNTLSI-C---TPGPAGTQARKSCPAITMTRPFNIKPR- 1000

  Fly   795 EQRHIHHMQYLAWPDHCVPSDPNL-------------FLEFTERVRAARNR-------TLL--QE 837
                          |:...||.|:             |..|...:..:|:|       ||.  |.
Zfish  1001 --------------DYSFVSDDNIQEVTLKKRLNGLGFSFFISELNTSRDRGSIVRIKTLFPGQP 1051

  Fly   838 IEESLKQVRLMDADADADENG----GL---------------MRERKCAASNGATPEDETPVSTS 883
            .|||   .|:.:.|.....||    ||               :|...|..:.|..|    .||..
Zfish  1052 AEES---GRIQEGDVILSINGEPLKGLSYQHVLQLLRNSPSEVRMLLCRPAQGTLP----AVSEK 1109

  Fly   884 VHQ 886
            :.|
Zfish  1110 IGQ 1112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 59/223 (26%)
FERM_N 38..102 CDD:286467 12/63 (19%)
FERM_M 125..232 CDD:278785 32/117 (27%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 26/100 (26%)
FA 333..369 CDD:285894 5/35 (14%)
PDZ_signaling 502..589 CDD:238492 20/92 (22%)
Y_phosphatase 666..955 CDD:278528 60/301 (20%)
PTPc 668..955 CDD:238006 58/299 (19%)
frmpd2XP_021335879.1 PKc_like 5..154 CDD:328722
B41 305..506 CDD:214604 59/222 (27%)
PH-like 502..603 CDD:327399 27/109 (25%)
PDZ_signaling 702..786 CDD:238492 20/86 (23%)
PDZ 865..953 CDD:214570 17/94 (18%)
PDZ_signaling 1010..1096 CDD:238492 17/88 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0792
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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