DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and si:dkey-178k16.1

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_009294955.1 Gene:si:dkey-178k16.1 / 569390 ZFINID:ZDB-GENE-090312-61 Length:1273 Species:Danio rerio


Alignment Length:518 Identity:187/518 - (36%)
Similarity:272/518 - (52%) Gaps:75/518 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ARDKKTPQRQQ-----CVTVLFLDDITHTFRIEKRAKGSELLDQVFQYLELSERDYFGLLFP--- 80
            :|..::||:.:     .|.||.||...:...:||..||..|||.|.::|.|.|:|||||.|.   
Zfish    39 SRMSRSPQKSKRPKTVPVKVLLLDGSAYESGVEKLCKGQVLLDMVCEHLNLLEKDYFGLSFSDTE 103

  Fly    81 -QKPGDVVRWVDAQKQFKKQCSSVSLDNDAVPL-LEFRVKFFVSDPSRLQEEFTRYQFYLQIKRN 143
             ||     .|:|..|:.|||..       ..|. ..|.|||:..|||:|.|:.|||...||::.:
Zfish   104 CQK-----NWLDPSKEIKKQIR-------VGPWHFSFAVKFYPPDPSQLIEDITRYYLCLQLRED 156

  Fly   144 ILLGKLPCSSNTQCLLASYTVQSELGDFNALEHQPGYLSGMQLLCDQTTEAERKVGELHKLHRGQ 208
            ||.|:||||..|..||.||.:|:||||::..||.|.|::..:...:||.|.|.:|.|||:.:||.
Zfish   157 ILSGRLPCSFVTHALLGSYAIQAELGDYDPEEHGPDYINEFRFAPNQTRELEERVMELHRTYRGM 221

  Fly   209 LPADAEYNYLEHAKRLELYGIDLHRATDSNGKELQLGVSAVGLLVFQHSLRVNTFSWSKMVKVSF 273
            .||:||.|:||:||:|.:||:|||.|.||.|.::.|||.|.|||:::..||:|.|:|.|::|:|:
Zfish   222 SPAEAEINFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCASGLLIYRDRLRINRFAWPKILKISY 286

  Fly   274 KRKDFFIQLRREPSENYDTLLGFGMSSHKHAKALWKSCVEHHSFFRLKRPHRLSR-FLNISLGSK 337
            ||.:|:|::|....|.:::.:||.:.:|:.:|.|||.|:|||:||||..|....: ||.|  |||
Zfish   287 KRSNFYIKIRPGEYEQFESTIGFKLPNHRASKRLWKVCIEHHTFFRLVSPEPPPKGFLVI--GSK 349

  Fly   338 FYYSGRTELQAVQESKQRGRIHKVFVRSPSKRLLGAAGGVGTSGSSGGT--PMQQHSGSESANS- 399
            |.|||||:.|:.|.|....|....|.||.|:|.| .:..:....:.|.|  .:.||:.||...| 
Zfish   350 FRYSGRTQAQSRQASALIDRPAPQFERSISRRYL-LSRSIDGESALGDTMDRLSQHTSSEPVPSL 413

  Fly   400 ---------------------HNNGKPAGAGTILTITKT--------SRPHDNKVTSKEADSMPR 435
                                 |...:.....:..|.:||        ..|.|:| |..:.|..||
Zfish   414 PRDELDQDYLEPSLDQDLDQDHEQEEEQRLESDSTPSKTVELKREEAGSPVDSK-TELDQDLTPR 477

  Fly   436 KAWEQQSDE-YDI----QLDVGFIEQCTR-----------RFESASPSPMPPAYSSGQHSPIL 482
            ...||..|: .|:    |..:..:::..|           |...||....|...|:.:.|.::
Zfish   478 PKQEQFLDKPEDVLQKHQASINELKRALREPNSKLVHREKRLSGASSGSTPEKKSASEESLLI 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 89/201 (44%)
FERM_N 38..102 CDD:286467 29/67 (43%)
FERM_M 125..232 CDD:278785 52/106 (49%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 43/93 (46%)
FA 333..369 CDD:285894 17/35 (49%)
PDZ_signaling 502..589 CDD:238492
Y_phosphatase 666..955 CDD:278528
PTPc 668..955 CDD:238006
si:dkey-178k16.1XP_009294955.1 B41 56..245 CDD:214604 89/200 (45%)
FERM_N 58..120 CDD:286467 29/66 (44%)
FERM_M 138..245 CDD:278785 52/106 (49%)
FERM_C_4_1_family 240..333 CDD:270005 43/92 (47%)
FA 342..383 CDD:285894 21/42 (50%)
SAB 482..522 CDD:282265 6/39 (15%)
4_1_CTD <1210..1261 CDD:283537
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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