DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and pdzd2

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_003198698.3 Gene:pdzd2 / 569088 ZFINID:ZDB-GENE-060526-297 Length:2433 Species:Danio rerio


Alignment Length:734 Identity:146/734 - (19%)
Similarity:228/734 - (31%) Gaps:274/734 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 NYDTLLGFGMSSHKHAKALWKSC---------------VEHHSFFRLKRPHRLS----------- 327
            |..:|:|.   ||:.|.|:.:|.               |:.|.:.....|..:|           
Zfish   395 NGHSLVGL---SHQEAVAILRSTAGLVQLVVASRDESEVDFHKYPSTSLPDLVSTCSGPDASPSP 456

  Fly   328 --------------RFLNISLGSKFYYSGRTELQAVQESKQRGRIH--KVFVRSPSKRLLGAAGG 376
                          |..::||.::..::....|.      :||||.  |...|||:....     
Zfish   457 GEEKENMEPDMEDVRASSLSLPTQDLFTDHDRLD------ERGRIEGPKGCCRSPTPMKF----- 510

  Fly   377 VGTSGSSGGTPMQQHSGSESANSHNNGKPAGAGTILTITKTSRPHDNKVTSKEADSMPRKAWEQQ 441
              .|.|.||....:..|.:......|| ..|:......|:..|.|          |:|     ||
Zfish   511 --RSRSQGGGSRLESVGEDDELIVENG-DTGSDVAEKPTRGGRKH----------SLP-----QQ 557

  Fly   442 SDEYDIQLDVGFIEQCTRRFESASPSPMPPAYSSGQHSPILLPTTIADAVGHQQPESGSDLITIR 506
            .|...|:.:...:::..|...:..               :..|..:|      ||...|:::.::
Zfish   558 LDTVGIRQEYQIVKKSARSLSTVQ---------------VESPWRLA------QPSIISNIVLMK 601

  Fly   507 LQADEQGR-YGFNVKGGVDLS---LPVQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVHGLRHE 567
                .||: .||::.||.|.:   :.:.|..:.|:..| ....|:.||||:|.:||..:.||.|:
Zfish   602 ----GQGKGLGFSIVGGQDSARGRMGIFVKTIFPNGAA-AADGRLKEGDEILEVNGESLQGLTHQ 661

  Fly   568 QVVAMIRDCRHQASGELLLTVRPQ-RS-------APLLLEEEPLYQYVPESDEIGS---HSNLLD 621
            |.:...:..:   .|.:.||||.: ||       .|.||....    .|.|:..|.   ..:..:
Zfish   662 QAIQTFKQLK---KGVVTLTVRTRLRSPSLTPCPTPTLLSRSS----SPNSNASGGTPVPQSFDE 719

  Fly   622 GDALFTQSLLLLSDGLASGALLAQYELMYRKNPDLAITEARKPANAPKNRYRDISPYDCTR---- 682
            ||:                          ||.|            .||:|.  |......:    
Zfish   720 GDS--------------------------RKGP------------GPKDRI--IMEVTLNKEPGV 744

  Fly   683 --------VSLVNSLTGDYINANYVNMEIPGGAVNRYIATQGPLASTTTDFWRMVQQESSHLLVM 739
                    ::|.||..|.||::      :..|:|.:                             
Zfish   745 GLGIGACCLTLENSAPGIYIHS------LAPGSVAK----------------------------- 774

  Fly   740 LTTVMESGRQKCHQYWPVTGEELQ---LAEGFSVRCLSE-KPDETGSFVFR------------EF 788
                |:....:..|...|....|:   |:|.:::  ||| .|......:.|            |.
Zfish   775 ----MDGRLSRGDQLLEVDSVSLRHAALSEAYAI--LSECGPGPVSLIISRHPNPKVSEQEMDEV 833

  Fly   789 VLKDKHEQRHIHHMQYLAWPDHCVPS----------DPNL------FLEFTERVRAARNRTLLQE 837
            :.:..|...|..|.  |..|... ||          :|.|      |||     .|:|..:|..|
Zfish   834 ITRSTHRDSHSSHT--LGLPSKS-PSPTVKVKQGEGNPALSWTMKRFLE-----PASRQGSLSSE 890

  Fly   838 IE-------------ESLKQVRLMDADADADENGGLMRERKCAAS--NGATPEDETPVSTSVHQC 887
            .|             .||.:...|.:..|    ..|...|.|..|  ..|.|:.......|....
Zfish   891 AELSQYFTVHDVPSQSSLSETMAMGSSDD----DMLHSSRSCNTSMEESAAPQPHVYRDGSYRGS 951

  Fly   888 ISAANPPVIVHCSAGIGRT 906
            .|:...|.....|.|.|||
Zfish   952 GSSPTTPECCKASGGTGRT 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 10/45 (22%)
FA 333..369 CDD:285894 11/37 (30%)
PDZ_signaling 502..589 CDD:238492 25/90 (28%)
Y_phosphatase 666..955 CDD:278528 59/300 (20%)
PTPc 668..955 CDD:238006 59/298 (20%)
pdzd2XP_003198698.3 PDZ_signaling 346..423 CDD:238492 8/30 (27%)
PDZ_signaling 597..680 CDD:238492 25/90 (28%)
PDZ_signaling 733..817 CDD:238492 19/124 (15%)
PDZ_signaling 1185..1268 CDD:238492
NRIP1_repr_1 1556..>1766 CDD:292315
PDZ_signaling 2216..2288 CDD:238492
PDZ_signaling 2345..2427 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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