DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and LOC564220

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_017212193.1 Gene:LOC564220 / 564220 -ID:- Length:1406 Species:Danio rerio


Alignment Length:790 Identity:161/790 - (20%)
Similarity:278/790 - (35%) Gaps:234/790 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 LPCSSNTQ----------CLLASYTVQ-SELGDFNALEHQPGYLSGMQLLCDQTTEAERKVGELH 202
            |||||..|          .|..|...| .||..|...:.:.|:  |.::|..:..|....:|.: 
Zfish   704 LPCSSPKQDASLHYSKPKALTESIVPQYKELDVFIKRDQETGF--GFRVLGGEGAEQPVYIGAI- 765

  Fly   203 KLHRGQLPADAEYNYLEHAKRL----ELYGID------------LHRATDS--NGKELQLGVSAV 249
                  :|..|    .|...||    ||.|||            |...|::  ||:.|   :|..
Zfish   766 ------IPQGA----AEKEGRLRAGDELIGIDGITVKGKSHKQVLDLMTNAARNGQVL---LSVR 817

  Fly   250 GLLVFQHSLR---------VNTFSWSKMVKV-SFK-RKDFFIQLRREPSENYDTLLGFGM----S 299
            ..::|:.:|.         ||.......::| |.| ::.|.|.|.|..:|      |||.    |
Zfish   818 RKVIFRDALEDVGSGALTLVNGSPRLPRIQVPSVKDQESFDITLHRRDNE------GFGFVILTS 876

  Fly   300 SHKHAKALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGRTELQAVQESKQRGRIHKVFVR 364
            ..|....:..|.:          ||::.|.:.                                .
Zfish   877 KSKPPPGVCVSVI----------PHKIGRIIE--------------------------------G 899

  Fly   365 SPSKR--LLGAAGGVGTSGSSGGTPMQQHSGSESANSHNN----GKPAGAGTILTITKTSR---P 420
            ||:.|  ||.....:....|.....:          |||:    .|.||....||:.....   |
Zfish   900 SPTDRCGLLNVGDRISAVNSQSIVEL----------SHNDIVQLIKDAGNSVTLTVVPEDEYKGP 954

  Fly   421 HDNKVTSKEADSMPRKAWEQQSDE-YDIQLDVGFIEQCTRRFESASPSPMPPAYSSGQHSPILLP 484
            .....::|::.:...|..:...|| |::.:|.  |.......|..:|:                 
Zfish   955 PSGASSAKQSPAPQHKTLKSTQDERYNLDMDE--IRDELTWTEYKTPN----------------- 1000

  Fly   485 TTIADAVGHQQPESGSDLITIRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCE 549
                      :.||....|.:.|:...:| :||:::||.:.::.:.:.::....||.: ..|:..
Zfish  1001 ----------RQESKQGCIAVELERGPRG-FGFSLRGGTEYNMGLYILRLAEDGPALQ-DGRIHV 1053

  Fly   550 GDEVLMINGRDVHGLRHEQVVAMIRDCRHQASG-ELLLTVRPQRSAP-------LLLEEEPLYQY 606
            ||:|:.|||....|:.|.:.:.:|     ||.| ::||.:|||...|       ::|.:.|    
Zfish  1054 GDQVVEINGEQTQGISHTRAIELI-----QAGGNKVLLLLRPQALLPENSSAGDVILPDPP---- 1109

  Fly   607 VPESDEIGSHSNLLDGDALFTQSLLLLSDGLASGALLAQYELMYRKNPDLAITEARKPANAP--- 668
                   |||::.:...:..|.:.:....||..|:|....:....|:.....|.:.:.:..|   
Zfish  1110 -------GSHTSNIPLSSHPTSTSVKKRTGLTDGSLNPSKDSKREKHTKTPNTSSSRVSQQPRRI 1167

  Fly   669 KNRYRDISPYDCTRVSLVNSL-TGDYINANYVNMEIPGGAVNRYIATQGPLASTTTDFWRMVQQE 732
            |:|            |..|.| .||...:     :.|..|.::..:.:..|..:|.|   ..:..
Zfish  1168 KSR------------SAENLLDLGDTEKS-----KSPSKAKDKAHSHKEKLQQSTRD---SQKNR 1212

  Fly   733 SSHLLVMLTTVMESGRQKCHQYWPVTGEELQLAEGFSVRCLSEKPDETGSFVFREFVLKDKHE-Q 796
            ||.......:..:|.|::         :|:::.|..... |.::...|.....||..::.::| |
Zfish  1213 SSRQHSRSVSPQKSRRER---------QEVEIGETEESH-LDQRKSGTDRRKKRESAVRKRNETQ 1267

  Fly   797 RHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARN------RTLLQEIEESLKQVRLMDADADAD 855
            ......:..:..|..|.......||.|::.:..||      .||:....:| ||.:         
Zfish  1268 ERESERKVKSKEDEEVQRKGQAELEGTQKKKKQRNIEMQNGDTLISPDRKS-KQTK--------- 1322

  Fly   856 ENGGLMRERK 865
            :.|.|..:||
Zfish  1323 DKGSLRDQRK 1332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 27/109 (25%)
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785 27/109 (25%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 28/122 (23%)
FA 333..369 CDD:285894 2/35 (6%)
PDZ_signaling 502..589 CDD:238492 24/87 (28%)
Y_phosphatase 666..955 CDD:278528 41/211 (19%)
PTPc 668..955 CDD:238006 41/209 (20%)
LOC564220XP_017212193.1 PDZ_signaling 15..98 CDD:238492
NK 120..>198 CDD:327404
WW 291..323 CDD:197736
WW 338..367 CDD:306827
PDZ 412..498 CDD:214570
PDZ 589..664 CDD:214570
PDZ_signaling 733..817 CDD:238492 24/99 (24%)
PDZ_signaling 857..946 CDD:238492 28/146 (19%)
PDZ_signaling 1011..1084 CDD:238492 21/79 (27%)
Neuromodulin_N <1182..>1365 CDD:331332 33/179 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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