Sequence 1: | NP_001163309.2 | Gene: | Ptpmeg / 38059 | FlyBaseID: | FBgn0261985 | Length: | 974 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005160562.1 | Gene: | lnx1 / 561226 | ZFINID: | ZDB-GENE-030131-9439 | Length: | 769 | Species: | Danio rerio |
Alignment Length: | 550 | Identity: | 116/550 - (21%) |
---|---|---|---|
Similarity: | 179/550 - (32%) | Gaps: | 187/550 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 182 SGMQLLCDQTTEAERKVGELHKLHRGQLPADAEYNYLEHAKRL----ELYGIDLHRATDSNGKEL 242
Fly 243 QLGVSAVG-------------------------LLVFQHSLRVNTFSWSKM----VKVSFKRKDF 278
Fly 279 FIQLR--REPSENYDTLLGFGMSSHKHAKA-------------------------------LWKS 310
Fly 311 CVEHHSF-FRL------KRPHRL---SRFLNISLGSKFYYSGRTELQAVQESKQRGRIHKVFVRS 365
Fly 366 ---PSKRLLGAAGGVGTSGSSGGTPMQ-QHSGSESANSHNNGKPAGAGTILTITKTSRPHDNKVT 426
Fly 427 SKEADSMPRKAWE---------------QQSD--EYDIQLDVGFIE-------QCTRRFESASPS 467
Fly 468 PM--------PPAYSS-----GQHSPILL-PTTIADAVGHQQPESGSDLI--------------- 503
Fly 504 --TIRLQADEQGRYGFNVKGG---VDLSLPVQVSKVVPHTPA-----DRCTPRVCEGDEVLMING 558
Fly 559 RDVHGLRHEQVVAMIRDCRHQASGELLLTV 588 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptpmeg | NP_001163309.2 | B41 | 35..232 | CDD:214604 | 13/53 (25%) |
FERM_N | 38..102 | CDD:286467 | |||
FERM_M | 125..232 | CDD:278785 | 13/53 (25%) | ||
FERM_C_PTPN4_PTPN3_like | 226..320 | CDD:270010 | 26/156 (17%) | ||
FA | 333..369 | CDD:285894 | 9/38 (24%) | ||
PDZ_signaling | 502..589 | CDD:238492 | 25/111 (23%) | ||
Y_phosphatase | 666..955 | CDD:278528 | |||
PTPc | 668..955 | CDD:238006 | |||
lnx1 | XP_005160562.1 | RING | 57..93 | CDD:214546 | |
PDZ_signaling | 297..381 | CDD:238492 | 15/87 (17%) | ||
PDZ_signaling | 411..491 | CDD:238492 | 19/81 (23%) | ||
PDZ_signaling | 536..621 | CDD:238492 | 16/88 (18%) | ||
DegQ | <548..621 | CDD:223343 | 11/74 (15%) | ||
PDZ_signaling | 678..762 | CDD:238492 | 25/93 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |