DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and epb41a

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_009292404.1 Gene:epb41a / 559643 ZFINID:ZDB-GENE-070705-81 Length:670 Species:Danio rerio


Alignment Length:667 Identity:207/667 - (31%)
Similarity:302/667 - (45%) Gaps:146/667 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VLFLDDITHTFRIEKRAKGSELLDQVFQYLELSERDYFGLLFPQKPGDVVRWVDAQKQFKKQCSS 102
            |..|||......:||.|||.:|..:|..:|.|.|:||:||...:.| .:..|:|..|:.::|...
Zfish     5 VKLLDDSLFECELEKHAKGQDLFAKVCDHLNLLEKDYYGLAIWETP-TIKTWLDFTKEIRRQIQG 68

  Fly   103 VSLDNDAVPLLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRNILLGKLPCSSNTQCLLASYTVQSE 167
            ...|      ..|.|||:..||::|.|:.|||...||::::|..|:||||..|..||.||.:|||
Zfish    69 TDYD------FTFNVKFYPPDPAQLSEDITRYFLCLQLRKDIKNGRLPCSFVTLALLGSYALQSE 127

  Fly   168 LGDFNALEHQPGYLSGMQLLCDQTTEAERKVGELHKLHRGQLPADAEYNYLEHAKRLELYGIDLH 232
            ||:::...|...|...:||:..||.|.|.||.|||:.:|...||.|:..:||:||:|.:||:|||
Zfish   128 LGEYDPEVHASDYAKELQLIPGQTKELEDKVMELHRTYRSMSPAQADMMFLENAKKLAMYGVDLH 192

  Fly   233 RATDSNGKELQLGVSAVGLLVFQHSLRVNTFSWSKMVKVSFKRKDFFIQLRREPSENYDTLLGFG 297
            :|.|.:|.::.|||.:.||:|::..||:|.|.|.|::|||:||..|||::|....|:|::.:||.
Zfish   193 QAKDLDGVDIMLGVCSSGLMVYKDKLRINRFPWPKVLKVSYKRSSFFIKIRPSDLEHYESAIGFK 257

  Fly   298 MSSHKHAKALWKSCVEHHSFFRLKRPHRLS---RFLNISLGSKFYYSGRTELQAVQESKQRGRIH 359
            :.::|.||.|||.|||||:||||......:   :||  :|||||.|||||:.|..|.|....|..
Zfish   258 LPNYKAAKKLWKVCVEHHTFFRL
TSTEAATTPRKFL--ALGSKFRYSGRTQAQTRQASSMIDRPA 320

  Fly   360 KVFVRSPSKR----LLGA---------------------AGGVGTSGSSGGTPMQQHSGSE---- 395
            ..|.||.|||    |.||                     .|.|..|..:.||...:...|.    
Zfish   321 PHFQRSTSKRASRSLDGAMVSTPDKNARPVSAPIMSPISPGDVAPSPVASGTRSDRKETSTPTGR 385

  Fly   396 ----------SANSH-NNG------KPAGAGTILTITKTSRPH-DNKVTSKEADSMPRKAWEQQS 442
                      .|.:| .:|      |..|...|.|:.:..|.| |..|.:  |.:..||:   ||
Zfish   386 LRSTDRKSEVRAEAHVTDGSKTLSTKAEGTHEIKTVARRERRHRDAPVVT--ATNGERKS---QS 445

  Fly   443 DEYDIQL--------------------------DVG-----------FIEQCTRRFESASPSPMP 470
            ...|.::                          ||.           .|.:..|.|..:.|.|.|
Zfish   446 PRVDTEMVRMRKKRAKKIEGETIYIRHSNLMLEDVDKTQTEIMRHHTSISELKRSFMESVPEPRP 510

  Fly   471 PAYSS--GQHSPILLPTTIADAVGHQQPESG---------SDLI--------------------T 504
            ..:..  ..|||.    ..|...|..||:|.         ||:.                    |
Zfish   511 SEWDKRLSTHSPF----RTASINGQMQPDSPVVKTKTITISDVTNSLRSEIATKDIPIVHTETKT 571

  Fly   505 IRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEG------DEVLMINGRDVHG 563
            |..::.:..... ..:.|:.||.....|:.|..|...:.|..|..|      ::.::|.| |.. 
Zfish   572 ITYESAQPNALA-EKESGMLLSAQTITSETVSTTTTTQITKTVKGGISETRIEKRIVITG-DTE- 633

  Fly   564 LRHEQVVAM-IRDCRHQ 579
            :.|::.:|. |::.:.|
Zfish   634 IDHDKALAQAIKEAKEQ 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 78/193 (40%)
FERM_N 38..102 CDD:286467 23/63 (37%)
FERM_M 125..232 CDD:278785 48/106 (45%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 46/93 (49%)
FA 333..369 CDD:285894 18/35 (51%)
PDZ_signaling 502..589 CDD:238492 18/105 (17%)
Y_phosphatase 666..955 CDD:278528
PTPc 668..955 CDD:238006
epb41aXP_009292404.1 B41 2..192 CDD:214604 78/193 (40%)
FERM_N 5..66 CDD:286467 22/61 (36%)
FERM_M 87..192 CDD:278785 48/104 (46%)
FERM_C_4_1_family 187..280 CDD:270005 46/92 (50%)
FA 291..333 CDD:285894 22/43 (51%)
SAB 476..522 CDD:282265 9/45 (20%)
4_1_CTD 561..666 CDD:283537 18/93 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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