DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and Ptpn13

DIOPT Version :10

Sequence 1:NP_612031.3 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_038948202.1 Gene:Ptpn13 / 498331 RGDID:1563360 Length:2465 Species:Rattus norvegicus


Alignment Length:623 Identity:161/623 - (25%)
Similarity:220/623 - (35%) Gaps:204/623 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 GSSGGTPMQQHSGSESANSHNNGKPAGAGTILTITKTSRPHDNKVTSKEADSMPRKAWE-QQSDE 444
            |....||.:..|......:.....|.|.|       .|.|.     .|.||.|..:.:. |:||.
  Rat  1979 GQPALTPKKSFSKVNGDGASGAMCPGGKG-------LSSPR-----KKSADLMEARDFSFQESDS 2031

  Fly   445 YD------------IQ--LDV------GFIEQCTRRFESASPSPMPPAYSSGQHSPILLPTTIAD 489
            .|            ||  |||      ..:.|......:.||.|:   .::|:.|          
  Rat  2032 RDDDVYDDPQEAEVIQSLLDVVDEEAQNLLNQTKASRRACSPDPL---RTNGEAS---------- 2083

  Fly   490 AVGHQQPESGSDLITIRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEGDEVL 554
                   |.|.|       .|..|.           .||..|.:.|.......|...:       
  Rat  2084 -------EDGED-------TDCDGS-----------PLPEDVPESVNGGGGKACFASL------- 2116

  Fly   555 MINGRDVHGLRHEQVVAMIRDCRHQASGELLLTVRPQRSA---PLLLEEE-----PLYQYVPESD 611
                     ::..|....:::...|.|.|.......:..:   ||.|..|     |:.:..|...
  Rat  2117 ---------IQASQEEKPVKEEATQESRESTTETTDREDSSKDPLFLTNEELAALPVVRVPPSGK 2172

  Fly   612 EIGSH----SNLLDGDALFTQSLLLLSDGLASGALLAQYELMYRKNPDLAITEARKPANAPKNRY 672
            ..|:.    ...|.|         ||..|:.|..|....||   |..|..:....| .|..||||
  Rat  2173 YTGTQLQATIRTLQG---------LLDQGIPSKELENLQEL---KPLDQCLIGQTK-ENRRKNRY 2224

  Fly   673 RDISPYDCTRVSLVNSLTGDYINANYVNMEIPGGAVN-RYIATQGPLASTTTDFWRMVQQESSHL 736
            ::|.|||.|||.|.:.  |.||||:::  .||.|... .|||.||||.:|..|||:||.:::|.:
  Rat  2225 KNILPYDTTRVPLGDE--GGYINASFI--RIPVGTQEFVYIACQGPLPTTVGDFWQMVWEQNSTV 2285

  Fly   737 LVMLTTVMESGRQKCHQYWP-------VTGEELQLA-------EGFSVRCLSEKPDETGSFVFRE 787
            :.|:|..:|..:.||.:|||       :..|.|:||       :||.||.::.:..:||      
  Rat  2286 IAMMTQEVEGEKIKCQRYWPSILGTTTMANERLRLALLRMQQLKGFVVRVMALEDIQTG------ 2344

  Fly   788 FVLKDKHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADA 852
                   |.|||.|:.:.|||||..||.|...|.|...:|..|.                     
  Rat  2345 -------EVRHISHLNFTAWPDHDTPSHPEDLLTFISYMRHIRR--------------------- 2381

  Fly   853 DADENGGLMRERKCAASNGATPEDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALA 917
                                                   :.|||.||||||||:|.||.:|..|.
  Rat  2382 ---------------------------------------SGPVITHCSAGIGRSGTLICIDVVLG 2407

  Fly   918 LMEAREPVYPLDIVRTMRDQRACMVQNVSQYRFVCECI 955
            |:.........|:||.||.||..|||...||.|..:.:
  Rat  2408 LISQDLEFDISDLVRCMRLQRHGMVQTEGQYVFCYQVV 2445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_612031.3 B41 35..232 CDD:214604
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:462582
PDZ_PTPN3-4-like 500..589 CDD:467190 12/88 (14%)
PTPc-N3_4 692..961 CDD:350389 86/279 (31%)
Ptpn13XP_038948202.1 KIND 3..190 CDD:214801
FERM_F1_PTPN13 564..659 CDD:340715
B41 566..774 CDD:214604
PH-like 770..870 CDD:473070
PDZ1_PTPN13-like 1081..1172 CDD:467285
PTN13_u3 1168..1356 CDD:465189
PDZ2-PTPN13_FRMPD2-like 1354..1445 CDD:467254
PDZ3_PTPN13_FRMPD2-like 1494..1583 CDD:467181
PDZ4_PTPN13-like 1767..1851 CDD:467182
PDZ5_PTPN13-like 1862..1948 CDD:467183
PTPc-N13 2216..2449 CDD:350445 101/308 (33%)
Blue background indicates that the domain is not in the aligned region.

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