DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and tln1

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_021334842.1 Gene:tln1 / 494453 ZFINID:ZDB-GENE-031002-48 Length:2561 Species:Danio rerio


Alignment Length:1038 Identity:204/1038 - (19%)
Similarity:337/1038 - (32%) Gaps:302/1038 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FRLRGGGPELARDKKTPQRQQCVTVLFLDDITHTFRIEKRAKGSELLDQVFQYLELSERDYFGLL 78
            :.||.|.....:.|:.|     :.:..||....|..::.....|::|..:...:.::..|.:.|:
Zfish    71 YMLRNGDTLEYKKKQRP-----LKIRMLDGTVKTVMVDDSKIVSDMLMTICARIGITNYDEYSLV 130

  Fly    79 ------------------------------FPQK--PGDVVRWVDAQKQFKKQCSSVSLDNDAVP 111
                                          ..||  ..|.:.|:|..:..::|....|      .
Zfish   131 RDVGEEKKEETTGTLKRDKTLLRDDKKMEKLKQKLHTDDELNWLDHGRTLREQGVEES------E 189

  Fly   112 LLEFRVKFFVS-------DPSRLQEEFTRYQFYLQIKRNILLGKLPCSSNTQCLLASYTVQSELG 169
            :|..|.|||.|       ||.:|.      ..|:|.:.:||.|..|.|.:..|..|.|..|.:.|
Zfish   190 MLLLRRKFFYSDQNVDSRDPVQLN------LLYVQARDDILNGSHPVSFDKACEFAGYQCQIQFG 248

  Fly   170 DFNALEHQPGYLSGMQLLCDQ--TTEAERKVGELHKLHRGQLPADAEYNYLEHAKRLELYGIDLH 232
            |.|..:|:||:|...:.|..:  ..:.|:::.:.||..:.....:|:.||::.|:.|:.||:...
Zfish   249 DHNESKHKPGFLDLKEFLPKEYVKNKGEKRIFQAHKNCQNMTEIEAKVNYVKLARSLKTYGVSFF 313

  Fly   233 RATDSNGKELQLGVSAVGLLVFQHSLRVNTFSWSKMVKVSFKRKDFFIQLRREPSENYDTLLGFG 297
                                               :||...|.|:..:          ..|||..
Zfish   314 -----------------------------------LVKEKMKGKNKLV----------PRLLGIT 333

  Fly   298 MSSHKHAKALWKSCVEHHSFFRLKRPHRLSRFLNISLG--SKFYYSGRTELQAVQESKQ-----R 355
            ..|........|..::..|...:||.....:...:..|  ...|||.:|     .|.:|     .
Zfish   334 KESVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQT-----TEGEQIAQLIA 393

  Fly   356 GRIHKVFVRSPSKRLLGAAGGVGTS------GSSGGTPMQQ-------------------HSGSE 395
            |.|..:..:..||...|..|...::      .....|.:||                   .||:.
Zfish   394 GYIDIILKKKKSKDHFGLEGDEESTMLEDSVSPKKSTVLQQQFNKMGKVETGSVALPAIIRSGAG 458

  Fly   396 SANSHNNGKPAGAGTILTITKTSRPHDNKVTSKEA-------DSMPR-KAWEQQSDEYDIQLDVG 452
            ...|...|....|...:|..:..|.|...:||.:.       .||.. :|.:...||:|....:|
Zfish   459 GPESMKMGSMPQAKQHITSGQMHRGHMPPLTSAQQALTGTINSSMQAVQAVQASLDEFDALPPLG 523

  Fly   453 FIEQCTRRFESASPS--------------PMPPAYSSGQHSPILLPTTIAD-------AVGHQQP 496
                    .:|||.:              ....|.::|..|.:.|  |..|       |||....
Zfish   524 --------TDSASQAWRKNKMDESKHEIHSQVDAITAGTASMVNL--TAGDPAETDYTAVGCAVT 578

  Fly   497 ESGSDLIT----IRLQA---DEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEGDEVL 554
            ...|:|..    ::|.|   :::|..|..:.|... :|...||.::.........||    ..:|
Zfish   579 TISSNLTEMSKGVKLLAALMEDEGGNGQQLLGAAK-NLACAVSDMLKTAQPSSTEPR----QNLL 638

  Fly   555 MINGRDVHGLRHEQVVAMIRDCRHQASGELLLTVRPQRSAPLLLEEEPLYQYVPESDEIGSHSNL 619
            ...|.                 ..|||||||                   |.:.|||......::
Zfish   639 QAAGN-----------------VGQASGELL-------------------QQIGESDADQHFQSV 667

  Fly   620 LDGDALFTQS-----------LLLLSDGL--ASGALLAQYELMYRKNPDLAITEARKPANAPKNR 671
              |.|.||.|           |:.|:..:  |:.||:.:.:.:.:|:.|.| .:.:..|.|.:..
Zfish   668 --GTAAFTHSRRTGYSQMLDMLMQLAKAVANAAAALVLKAKNVAQKSEDSA-QQNKVIAAATQCA 729

  Fly   672 YRDISPYDCTRV------------------SLVNSLTGDYINANYVNMEIPGGAVNRYIATQGPL 718
            ........||||                  .||.......:.|::      |...:.::..|...
Zfish   730 LSTSQLVACTRVVAPTISSPVCQEQLIEAGKLVAKSVEGCVEASH------GATGDEHLLKQVGA 788

  Fly   719 ASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWPVTGEELQLAE---------GFSVRCLS 774
            |:|.      |.|..:.||..:.. ..||.|...::...|...|.:.:         |..||...
Zfish   789 AATG------VTQALNELLQHIRQ-YASGGQPIGRHGEATDRILDVTDNIFSSMGDAGEMVRQAR 846

  Fly   775 EKPDETGSFVFREFVLKDKHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTER-VRAARNRTLLQEI 838
            .....|...|  ..:..|...:..:.:.:.|.       |...|..:.|.| |.||:......:.
Zfish   847 ILAQATSDLV--NAIKADAEGESDLENSRKLL-------SAAKLLADATARMVEAAKGAAANPDS 902

  Fly   839 EESLKQVR-----LMDADADADENG---GLMRERKCAASNGATPEDETPVSTSVHQCISAANP 893
            ||..:::|     |..|...|.:|.   .|:.:.:.||...|....:| ::.:.|...|..||
Zfish   903 EEQQQKLREAAEGLRMATNAAAQNAIKKRLVNKLENAAKQAAAAATQT-IAAAQHAASSNKNP 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 52/237 (22%)
FERM_N 38..102 CDD:286467 13/95 (14%)
FERM_M 125..232 CDD:278785 30/108 (28%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 12/93 (13%)
FA 333..369 CDD:285894 10/42 (24%)
PDZ_signaling 502..589 CDD:238492 20/93 (22%)
Y_phosphatase 666..955 CDD:278528 51/264 (19%)
PTPc 668..955 CDD:238006 50/262 (19%)
tln1XP_021334842.1 FERM_f0 4..83 CDD:318667 3/11 (27%)
B41 88..313 CDD:214604 52/236 (22%)
FERM_C_Talin 309..400 CDD:269973 22/140 (16%)
Talin_middle 491..652 CDD:312608 38/192 (20%)
VBS 1253..1369 CDD:312463
talin-RS 1672..1843 CDD:213393
VBS 1866..1990 CDD:312463
talin-RS 1991..2156 CDD:213393
ILWEQ 2354..2549 CDD:214607
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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