DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and PTPRQ

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_016874762.1 Gene:PTPRQ / 374462 HGNCID:9679 Length:2536 Species:Homo sapiens


Alignment Length:601 Identity:151/601 - (25%)
Similarity:221/601 - (36%) Gaps:202/601 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   480 PILLPTTIADAVGHQQPESGSDLITIRL----QADEQG----------RYGFNVKGGVDLSLPVQ 530
            |...||.|.||.|.....|.:  ||||:    .:|:.|          ..|....|.|.......
Human  1970 PKTKPTPIYDATGKLLVTSTT--ITIRMPICYYSDDHGPIKNVQVLVTETGAQHDGNVTKWYDAY 2032

  Fly   531 VSKVVPH-----TPADRCTPRVCE--GDEVLMINGRD-----------------------VHGLR 565
            .:|..|:     .|...||....:  |:|.:.|.|.|                       :...|
Human  2033 FNKARPYFTNEGFPNPPCTEGKTKFSGNEEIYIIGADNACMIPGNEDKICNGPLKPKKQYLFKFR 2097

  Fly   566 HEQVVAMIRDCRH------------QASGELLLTVRPQRSAPLLL------------EEEPLYQY 606
            ...::....|..:            :.:.|::|:|.....:.:||            :::....|
Human  2098 ATNIMGQFTDSDYSDPVKTLGEGLSERTVEIILSVTLCILSIILLGTAIFAFARIRQKQKEGGTY 2162

  Fly   607 VPESDEIGSHSNLLDGDALFTQSLLLLSDGLASGALLAQYE--------------LMYRKN---- 653
            .|:..||  ....|..|.|.|.:.|.|.|     ..|.:|.              |.|||:    
Human  2163 SPQDAEI--IDTKLKLDQLITVADLELKD-----ERLTRYSSFFFRRKEIFVIQLLSYRKSIKPI 2220

  Fly   654 -------------------------------PDLAITEARKPANAPKNRYRDISPYDCTRVSLV- 686
                                           .||:.|:|..|.|..|||:.:|.||:..||.|: 
Human  2221 SKKSFLQHVEELCTNNNLKFQEEFSELPKFLQDLSSTDADLPWNRAKNRFPNIKPYNNNRVKLIA 2285

  Fly   687 -NSLTG-DYINANYVNMEIPGGAVNRYIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQ 749
             .|:.| |||||:|::..:   ..|.:|||||||..|..||||||.:..:..|||||...|.||.
Human  2286 DASVPGSDYINASYISGYL---CPNEFIATQGPLPGTVGDFWRMVWETRAKTLVMLTQCFEKGRI 2347

  Fly   750 KCHQYWPVTGEELQLAEGFSVRCLSEKPDETGSFVFREFVLKDKHEQRH-----IHHMQYLAWPD 809
            :||||||...:.:.:.....:..|.|.       |..::.::|...:||     :....:.|||:
Human  2348 RCHQYWPEDNKPVTVFGDIVITKLMED-------VQIDWTIRDLKIERHGDCMTVRQCNFTAWPE 2405

  Fly   810 HCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATP 874
            |.||.:....:.|.:.|||:|                                           .
Human  2406 HGVPENSAPLIHFVKLVRASR-------------------------------------------A 2427

  Fly   875 EDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYPLDIVRTMRDQRA 939
            .|.|               |:|||||||:|||||.|.:|.....:...:.|....:|..:|.:|.
Human  2428 HDTT---------------PMIVHCSAGVGRTGVFIALDHLTQHINDHDFVDIYGLVAELRSERM 2477

  Fly   940 CMVQNVSQYRFVCECI 955
            |||||::||.|:.:||
Human  2478 CMVQNLAQYIFLHQCI 2493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492 23/142 (16%)
Y_phosphatase 666..955 CDD:278528 93/296 (31%)
PTPc 668..955 CDD:238006 92/294 (31%)
PTPRQXP_016874762.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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