DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and Ptp52F

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster


Alignment Length:1048 Identity:219/1048 - (20%)
Similarity:351/1048 - (33%) Gaps:368/1048 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 WVDAQKQFKKQCSSVSLDNDAVPLLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRNILLGKL-PCS 152
            |::..|..:.:..|::..|..|          |.|.:.|..:....|.....|.| |.|:| ...
  Fly   484 WMEDDKLVEVEALSITTQNTTV----------VFDKNLLACQVYIIQIIPYTKEN-LDGQLRQVG 537

  Fly   153 SNTQCLLASYT--------VQSELGD---FNALEHQPGYLSGMQLL-----CDQTTE-----AER 196
            ..|:..:..||        ..||..|   |||     .|.:....:     |:.||:     |||
  Fly   538 VETKAAIVDYTKVKLEMKNAGSEFIDLIAFNA-----DYNNSCPTIFALFTCNATTQVRNPYAER 597

  Fly   197 KVGELHKLHRGQLPADAEYNYLEHAKRLELYGI----------DLHRAT--DSNGKELQLGVSAV 249
            .| |.|..............|..:..::.||.:          |:|..|  ....:.:.|..|.|
  Fly   598 YV-EGHSKQGFNASLSPLSPYATYVCKVILYNVAGPSEPVVDADMHTTTYFPEQPESVMLEKSTV 661

  Fly   250 GLLVFQHSLRVNTFSWSKMVKVSFKRKD--FFI-------------QLRREPSENYDTLL----- 294
            ..|:|.......|....|..:....|.:  :|:             :.:.:||.|:..|.     
  Fly   662 SSLLFNWQPPTYTNGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSETKGDPSVNFTGLAPAVRY 726

  Fly   295 --------GFGMSSH----------------------------------KHAKALWK-SCVEHH- 315
                    .|||..:                                  .:....|| .|..:. 
  Fly   727 MMQVAAQNDFGMGVYTEPVIGITLPAVSDSVTQLTVLTQGPVNNNAVYEANVTITWKVPCKSNGD 791

  Fly   316 -SFFRLK--------RPHRLSRFLNISLGSKFYYSGR-----TELQ-----AVQES--------- 352
             .:|:|.        .|....|.:.:..|:|   .||     ||:|     .|:.|         
  Fly   792 IEYFQLAFNGTRNNFAPVSFERRVELDTGNK---QGRMSYTETEMQPQFDYTVEVSVKNRDVEQL 853

  Fly   353 ------------------------KQRGRIHK-------VFVRSPSKRLLGAAGGVG------TS 380
                                    :.|..:.:       ..||.|:..:..|:|.:.      :.
  Fly   854 SSSVPGSWQSPAGLPTIPSDELIKQMRANVEETSNPTKTAIVRLPADIMTSASGDIKWMALMISQ 918

  Fly   381 GSSGGTPMQQHSGSESANSHNNGKPAGA-GT----ILTITKTSRPHDNKVTSKEADSMPRKAWEQ 440
            .:..|.|..::..|.......:.:.||| ||    :...|...|.|...|..:..|.      |.
  Fly   919 KNCAGVPHLKYDVSSDWPKVLSYQEAGADGTGDCSLEYQTTEERWHPEPVQRQRRDG------EV 977

  Fly   441 QSDEYDIQLDVGFIEQCTRRFESASPSPMPPAYSSGQHSPILLPTTIADAVGHQQPESG-SDLIT 504
            .||| :|...:| :::|         |.:...|.:|.    |||.|..:.|......|| ||...
  Fly   978 TSDE-EIVFTIG-LDKC---------SEVQKTYCNGP----LLPDTDYNVVVRLFTASGYSDAAV 1027

  Fly   505 IRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVHGLRHEQV 569
            :          .|..|..:.::| :.||              ||....:..:.|..|..:|..  
  Fly  1028 L----------NFKTKAAIKVTL-ILVS--------------VCSCLLLAFVLGLTVLWVRKR-- 1065

  Fly   570 VAMIRDCRHQASGELLLTVRPQRSAPLLLEEEPLYQYVPESDEIGSHSNLLDGDALFTQSLLLLS 634
            :|..||     ||:.:              |:|....:.::..|           .:|:      
  Fly  1066 LAWKRD-----SGQGI--------------EDPFGNVIAKNFAI-----------FYTE------ 1094

  Fly   635 DGLASGALLAQYELMYRKNPDLAITEARKPANAP-----KNRYRDISPYDCTRVSL-VNSLTGDY 693
                    :|:.|.:.|:..::.:.......:|.     ||||.||.|||..||.| :::...||
  Fly  1095 --------VAKPEKLAREFKEITVVALELSYSASELGCHKNRYADIFPYDKNRVILDIDAEGSDY 1151

  Fly   694 INANYVNMEIPGGAVNR--YIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWP 756
            |||::::     |...:  |||||||...:..|||||:.|.:..::|.:|...|....|||:|:|
  Fly  1152 INASFID-----GHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYP 1211

  Fly   757 VTGEELQLAEGFSVRCLS----EKPDETG-SFVFREFVLKDKHEQRHIHHMQYLAWPDHCVPSDP 816
            ..      ..|.:|...|    |..|.|. :.|..::.||:|     :.|..:..||||.||.||
  Fly  1212 YN------VRGLTVTIKSKEVLELYDRTELTVVHDKYGLKEK-----VIHYYFKKWPDHGVPEDP 1265

  Fly   817 NLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDETPVS 881
            ...:.|.::|:|                                  |::.:.|            
  Fly  1266 MHLIMFVKKVKA----------------------------------EKRPSYS------------ 1284

  Fly   882 TSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYPLDIVRTMRDQRACMVQNVS 946
                        |::||||||:||||..|.:|..:..:::...:...:.|:.:|.||..|||...
  Fly  1285 ------------PIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQ 1337

  Fly   947 QYRFVCEC 954
            ||.|:..|
  Fly  1338 QYTFLYAC 1345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 37/174 (21%)
FERM_N 38..102 CDD:286467 2/12 (17%)
FERM_M 125..232 CDD:278785 30/138 (22%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 25/170 (15%)
FA 333..369 CDD:285894 13/85 (15%)
PDZ_signaling 502..589 CDD:238492 15/86 (17%)
Y_phosphatase 666..955 CDD:278528 88/302 (29%)
PTPc 668..955 CDD:238006 87/300 (29%)
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 16/100 (16%)
PTPc 1100..1345 CDD:214550 88/318 (28%)
PTPc 1125..1348 CDD:238006 87/295 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443569
Domainoid 1 1.000 133 1.000 Domainoid score I1104
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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