DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg and Pez

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_001260127.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster


Alignment Length:1333 Identity:255/1333 - (19%)
Similarity:427/1333 - (32%) Gaps:492/1333 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RQQCVT--VLFLDDITHTF--------RIEKRAKGSELLDQVFQYLELSERDYFGLLFPQK---P 83
            ||..||  .||:..:.|..        .|...:||.|.||.|.|.|.:.:.::|||.:..|   .
  Fly    10 RQYNVTSKSLFVISVHHLLDTSSTVDCTISSESKGQECLDNVCQRLLIQQPEFFGLRYLVKGKDK 74

  Fly    84 GDVVRWVDAQKQFKKQCSSVSLDNDAVPLLEFRVKFFVSDPSR-LQEEFTRYQFYLQIKRNILLG 147
            .|..:|:|.::...:|....:    |.|.:..||:.:|:...| |.:|.||:.::||:|.:|..|
  Fly    75 EDEFKWIDLERSLSRQLEKYA----AGPKIYLRVRHYVTTGVRHLSDEATRFYYFLQLKSDIYEG 135

  Fly   148 KLPCSSNTQCLLASYTVQSELGDFNALEHQPGYLS-------GMQLLCDQTTEAERKVGELHK-- 203
            ::.|...|..|||.|..|:|...:...:....||.       .||.|.:..:..|..:.|:.:  
  Fly   136 RIACDIRTAILLALYCRQAEYDSYQGDKQSKDYLKKSLVLPRNMQGLANDDSMLEGLIVEVLQQQ 200

  Fly   204 ---LHRGQLPADAEYNYLEHAKRLELYGIDLHRATDSNGKELQLGVSAVGLLVFQHSLRVNTFSW 265
               .|..|  :.||..|::..::||.||.:...|.|:.|.:|.||::..|::|...:.| ..|.|
  Fly   201 AGIAHLSQ--SQAEEMYIQCCQQLEGYGEERFAAKDTLGNDLLLGLAINGMVVNADNGR-QYFPW 262

  Fly   266 SKMVKVSFKRKDFFIQLRREPSENYDTLLG-FGMSSHKHAKALWKSCVEHHSFFRLKRPHRLSRF 329
            .:...|:..::.  |::.:...:...:::| |..|....|:..||..:..|.||:        |:
  Fly   263 KEFHTVTIDKRT--IKIEQNKLDGGGSIVGSFIFSEADTARYFWKLTISQHKFFK--------RY 317

  Fly   330 LNI----SLGS------------------------------KFYYSGRTELQAVQESKQRGRI-H 359
            ::.    ||||                              :.::..:..:|..|:.:|:..| .
  Fly   318 IDTATPSSLGSGADAESGPLGVDSVGYVDYDYNEAAAAEQLQQHHQQQQHMQQQQQIQQQQMISS 382

  Fly   360 KVFVRSPSKRLLGAAGGV------GTSGSSGGTPMQQHSGSESANSHNNGKPAGAGTILTITKTS 418
            .:.:.:.:.::||.:...      ....|||   |..|.||.  |::||.:......:|...:.:
  Fly   383 NISLATSANQMLGQSSSCLDLSNNNLHSSSG---MLHHGGSN--NNNNNDERERLKAMLPTYRPA 442

  Fly   419 RPHDNKVTSKE------------ADSMPRKAW--EQQSDEY--------------------DIQL 449
            ..::..|..|.            |.:.|..|:  ..|.|.:                    |:..
  Fly   443 PDYETAVQLKYRTPSAEFHNVALAMAAPGNAYYAGSQPDVHNPGMHNENLLYGHMTAHRYPDVAQ 507

  Fly   450 DVGFIEQCTRRFES-----ASPSPMPPA------------------------------------- 472
            ....:......:::     :.|.||.||                                     
  Fly   508 PAAALHHHINLYQAQHQPQSHPQPMSPAQAYLELSQRMHMMRHKAPPPYVNRLSSSSTPDLAVAT 572

  Fly   473 ---------YSSGQHSPIL-----------------------LPTT----------IADAVGHQQ 495
                     |.||. ||.|                       :||:          ....:||.|
  Fly   573 PRPLQGFRNYVSGS-SPDLVSNRTLFNGGQYVALPAGGHAGNIPTSSGATMLHQYQYVSHMGHSQ 636

  Fly   496 P---------------ESGSDLITIRLQADEQ---GRYGFNV--------KGGVDLSLPVQVSKV 534
            |               |..|.:..:|..|..|   ...|..|        ..|...|:|...|..
  Fly   637 PYLPPHGTFENLNMIEEQPSIMSQLRQSAMSQAAAAAAGSVVTQSSPTLPPSGYRSSVPPPASSP 701

  Fly   535 VP-------HTPADRCTPRVCEGDEVLMING-----------------------------RDVHG 563
            :|       |..|   ||...:..   ::||                             :....
  Fly   702 LPPPVVASSHKSA---TPAPLQRS---LVNGSIEPIYENVPLPQRASGGSSGAANTEAMRQRASS 760

  Fly   564 LRHEQVVAMIRDCRHQASGEL--------------------------LLTVRPQ----------- 591
            ::....|..:...|:.:|..:                          ||.:.||           
  Fly   761 IQSAPGVVPVPAARNASSNNVVTVTVNSPPDDGNIKKYGADRAASTELLFLEPQAPKRTNRAASA 825

  Fly   592 -------------RSAPLLLEEEPLYQYVPESDEI------------------------------ 613
                         ||...|.:...:....|..|.:                              
  Fly   826 APDMGATPPPRQHRSTASLNKSSTVDMITPAGDTLQQQFSAMNLSANTSASTSSMFNSTLDTTSS 890

  Fly   614 --------------------------------------GSHSNL-----LDGDAL---------- 625
                                                  |.||.|     |..|.|          
  Fly   891 SAASKDLKRKKRWNFLSRSKTPDKQKSATLGREKATTAGQHSKLAAKLKLAQDDLNLPNRWSTGV 955

  Fly   626 ---------FTQSLL--LLSDGLASGALLAQYELMYRKNPDLAITEARKPANAPKNRYRDISPYD 679
                     :::..|  :|...|:...|..::|.:.::........|....|.|||...:..|||
  Fly   956 NKPQPISGRYSKDKLCQILDQKLSDSQLFMEFERIPKRREHALYECALLEENEPKNHDPNFLPYD 1020

  Fly   680 CTRVSLV---NSLTGDYINANYVNMEIPGGAVNR-YIATQGPLASTTTD-FWRMVQQESSHLLVM 739
            ..||.|.   ::..| |:||:.::..:  |...| ||..|.|....|.. ||:.|.:...:|:|.
  Fly  1021 DNRVRLTPCRDNRHG-YVNASSISATV--GTKQRFYIVAQSPQEPLTMRIFWQCVWEADVYLVVQ 1082

  Fly   740 LTTVMESGRQKCHQYWPVTGEELQLAEGFSVRCLSEKPDETGSFVFREFVLKDKHEQRHIHHMQY 804
            ||..|....:..||       .|:..:....:..|:..|...:...|.:.:..: ..|.:.::||
  Fly  1083 LTEDMSYIPRNSHQ-------RLEFGQFQVYQEFSQTTDRCTTIKLRLYHVPSR-RYRSVWYLQY 1139

  Fly   805 LAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKCAAS 869
            ..|.:...|.|.|.||:|.                |.|..|||                   |::
  Fly  1140 ADWAEQNCPRDVNHFLDFL----------------EELNSVRL-------------------AST 1169

  Fly   870 NGATPEDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYPLDIVRT- 933
            ....|...|             ||||::||..|.||:||.:..|..|..::..|   .|||.|. 
  Fly  1170 QEVPPGHNT-------------NPPVLLHCLEGGGRSGVTLTADLLLYTLDHNE---DLDIPRVI 1218

  Fly   934 --MRDQRACMVQNVSQYRFVCECICAAYMKISR 964
              :|.||..::.:::||:|:.. :...|:|.:|
  Fly  1219 GQLRHQRDSIIPSLAQYKFIYN-LLITYLKRTR 1250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 61/222 (27%)
FERM_N 38..102 CDD:286467 20/74 (27%)
FERM_M 125..232 CDD:278785 34/119 (29%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 24/94 (26%)
FA 333..369 CDD:285894 8/66 (12%)
PDZ_signaling 502..589 CDD:238492 21/159 (13%)
Y_phosphatase 666..955 CDD:278528 77/296 (26%)
PTPc 668..955 CDD:238006 76/294 (26%)
PezNP_001260127.1 B41 26..230 CDD:214604 57/209 (27%)
FERM_N 26..93 CDD:286467 18/66 (27%)
FERM_M 114..230 CDD:278785 33/117 (28%)
FERM_C_PTPN14_PTPN21 225..317 CDD:270009 24/102 (24%)
Y_phosphatase 1007..1243 CDD:278528 77/298 (26%)
PTPc 1009..1243 CDD:238006 76/296 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443540
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0792
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45706
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.