DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and Ptp4E

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster


Alignment Length:1036 Identity:230/1036 - (22%)
Similarity:351/1036 - (33%) Gaps:333/1036 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LLFPQKPGDV----VRW----VDAQKQFKK--QCSSVSLDNDAVPLLEFRVKFFVSDPSRLQEEF 131
            |.:|:..|.|    ::|    .:.:.:||.  |...:|..:..:|:.:.       .|.|     
  Fly   726 LEWPRPDGHVDFYTLKWWPTDEEDRVEFKNVTQLEDLSSPSVRIPIEDL-------SPGR----- 778

  Fly   132 TRYQFYLQIKRN-ILLGKLPCSSNTQCLLASYTVQSELGDFNALEHQPGYLSGMQLLCDQT---- 191
             :|:|.:|...| |..|....|:.|..|     :||::...|| .|:.|.        |:|    
  Fly   779 -QYRFEVQASSNGIRSGTTHLSTRTMPL-----IQSDVFIANA-GHEQGQ--------DETITLS 828

  Fly   192 ---TEAERKVGELHKLHRG--------QLPADAEYNYLEHAKRLELYGIDLHRATDSNGKELQLG 245
               |.|:....::::...|        :|..|.|       ::|...|:       :.||...:.
  Fly   829 YTPTPADSTRFDIYRFSMGDPTIKDKEKLANDTE-------RKLSFSGL-------TPGKLYNVT 879

  Fly   246 V----SAVGLLVFQHSLRVNTFSWSKMVKVSFKRKDFFIQLRREPSENYDTLLGFGMSSHKHAKA 306
            |    ..|..|..|...|::....|.:..:....::..:.......|..|..|.: :|:.:.|..
  Fly   880 VWTVSGGVASLPVQRLYRLHPLPISDLKAIQVAAREITLHWTAPAGEYTDFELQY-LSADEEAPQ 943

  Fly   307 LWKSCVEHHSFFRLK--RPHRLSRFLNISLGSKFYYSGRTELQAVQESKQRGRIHKVFVRSPSKR 369
            |.:: |..::...|:  ||:....|                              .|.|||    
  Fly   944 LLQN-VTKNTEITLQGLRPYHNYTF------------------------------TVVVRS---- 973

  Fly   370 LLGAAGGVGTSGSSGGTPMQQHSGSESANSHNNGKPAG-----------AGTILTITKTSRPHDN 423
              |:..|...:..|..|.|:. |...||:......|.|           .|.: |...:..|.:.
  Fly   974 --GSIQGTDFADVSVSTLMRS-SAPISASYQTLTAPPGKVDYFQPSDVQPGEV-TFEWSLEPAEQ 1034

  Fly   424 -------KVTSKEADSMPRKAWEQQSDEYDIQLDVGFIEQCTR------RFESASPSPMPPAYSS 475
                   ::|.:.||.    |.:..|.|:.:....|.|:....      |.::.|..........
  Fly  1035 HGPIDYFRITCQNADD----AADVSSYEFPVNATQGKIDGLVPGNHYIFRIQAKSALGYGAEREH 1095

  Fly   476 GQHSPILLPTTIADAVGHQQPESGSDLITIRLQADEQGRY------------------GFNVKGG 522
            .|..|||.|.....:|...:....|..|.|..:   ||.:                  |.|..| 
  Fly  1096 IQTMPILAPPVPEPSVTPLEVSRTSSTIEISFR---QGYFSNAHGMVRSYTIIIAEDVGKNASG- 1156

  Fly   523 VDLSLP----VQVSKV-VPHTPADRCTPRVCEGDEVLMINGRDVHGLRHEQVVAMIRDC-RHQA- 580
              |.:|    ||...| :|:...:...|       .|..||.....|..|.......:| :||| 
  Fly  1157 --LEMPSWQDVQAYTVWLPYQAIEPYNP-------FLTSNGSRKSSLEAEHFTIGTANCDKHQAG 1212

  Fly   581 --SGEL---------------------------------------------------LLTVRPQR 592
              :|.|                                                   |:.|..|.
  Fly  1213 YCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPITTERSDTVIVAATVSAVLLVAMVLVVVYCQH 1277

  Fly   593 SAPLLLEEEPLYQY------VPES----------DEIGSHSNLLDGDALFTQSLLLLSDGLASGA 641
            ...|:.....|.:.      :||.          .:...|..::..|:.|..|            
  Fly  1278 RCQLIRRASKLARMQDELAALPEGYITPNRPVHVKDFSEHYRIMSADSDFRFS------------ 1330

  Fly   642 LLAQYELMYRKNPDLAITEARKPANAPKNRYRDISPYDCTRVSL--VNSLTG-DYINANYVNMEI 703
              .::|.:.....|.|.:.|..|.|.||||:.:|.|||.:|..|  |:...| |||||||    :
  Fly  1331 --EEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINANY----M 1389

  Fly   704 PG-GAVNRYIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWPVTGEELQLAEG 767
            || .:...:|.|||||.||..:||||..:.:|..:||||...|.||:||.|||||  :.:.:..|
  Fly  1390 PGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPV--DRVAMFYG 1452

  Fly   768 -FSVRCLSEKPDETGSFVFREFVLKDKHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARN 831
             ..|:.:.:......|  ..||::....|.|.:.|..:..|||..||..|...:.|   |||.| 
  Fly  1453 DIKVQLIIDTHYHDWS--ISEFMVSRNCESRIMRHFHFTTWPDFGVPEPPQSLVRF---VRAFR- 1511

  Fly   832 RTLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDETPVSTSVHQCISAANPPVI 896
                                   |..|..||                               |:|
  Fly  1512 -----------------------DVIGTDMR-------------------------------PII 1522

  Fly   897 VHCSAGIGRTGVLILMDTALALMEAREPVYPLDIVRTMRDQRACMVQNVSQYRFVCECICA 957
            ||||||:||:|..|.:|..|..:...:.|....||..||.:|..|||...||..:.:|:.|
  Fly  1523 VHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLA 1583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 37/180 (21%)
FERM_N 38..102 CDD:286467 8/34 (24%)
FERM_M 125..232 CDD:278785 26/122 (21%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 16/97 (16%)
FA 333..369 CDD:285894 4/35 (11%)
PDZ_signaling 502..589 CDD:238492 26/164 (16%)
Y_phosphatase 666..955 CDD:278528 97/293 (33%)
PTPc 668..955 CDD:238006 96/291 (33%)
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020
fn3 247..328 CDD:278470
fn3 343..417 CDD:278470
fn3 443..525 CDD:278470
FN3 548..611 CDD:238020
FN3 620..706 CDD:238020
fn3 708..796 CDD:278470 18/82 (22%)
fn3 824..886 CDD:278470 12/75 (16%)
fn3 902..978 CDD:278470 17/113 (15%)
fn3 1013..1092 CDD:278470 13/83 (16%)
UP_III_II 1106..>1248 CDD:297589 27/154 (18%)
PTPc 1329..1582 CDD:214550 104/332 (31%)
PTPc 1355..1582 CDD:238006 97/292 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443516
Domainoid 1 1.000 133 1.000 Domainoid score I1104
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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