DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and Frmpd2

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_036014873.1 Gene:Frmpd2 / 268729 MGIID:2685472 Length:1383 Species:Mus musculus


Alignment Length:780 Identity:166/780 - (21%)
Similarity:282/780 - (36%) Gaps:199/780 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RQQCVTVLFLDDITHTFRIEKRAKGSELLDQVFQYLELSERDYFGLLFPQKPGDVVRWVD----- 91
            |..|  |:.|:......:.:..:....:.:.|..:..|.|..||||.:.:  |:...::|     
Mouse   330 RDLC--VVLLNGRCLEVKCDMESTAGAVFNAVMSFANLEETTYFGLAYVE--GEEFFFLDKDTRL 390

  Fly    92 ---AQKQFKKQCSSVSLDNDAVPLLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRNILLGKLPCSS 153
               |.:.:::|....|:|...   |..|::|||.....|:...||:|||||::::||..:|.|:.
Mouse   391 CKVAPEGWREQHPKGSVDTFT---LFLRIRFFVGHYRLLRHSLTRHQFYLQLRKDILEERLYCND 452

  Fly   154 NTQCLLASYTVQSELGDF-------NALEHQPGYLSGMQLLCDQTTEAERKVGELHKLHRGQLPA 211
            .|...|....:|:|.|.:       .|......|:....:........:.:|.|:|:|.......
Mouse   453 ETLLQLGVLALQAEFGSYPKEQVEGKAYFRIQDYIPARLIERMTAIRVQVEVSEMHRLSSAPWGE 517

  Fly   212 DAEYNYLEHAKRLELYGIDLHRATDSNGK---ELQLGVSAVGLLVFQ--HSLRVNT--FSWSKMV 269
            |||..:||..::|..||:.:||.:....:   ::.|||...|::|::  .|.|:.|  |.|.:..
Mouse   518 DAELEFLEIVQQLPEYGVLVHRVSPEKKRPEGKMALGVCTKGIIVYEVRGSRRIATSQFPWRETG 582

  Fly   270 KVSFKRKDFFIQLRREPSENYDTLLGFGMSSHKHAKALWKSCVEHHSF---FRLKRP-HRLS--- 327
            .:|..||...|     .|........|..:|.|..|.|...|...|.|   ...|.| ||.:   
Mouse   583 MISTHRKKLTI-----TSSTTGKKYTFVTNSSKTCKYLLGLCSSQHWFNAQTGSKHPSHRFTGQD 642

  Fly   328 RFLNI-SLGSKFYYSGR-----------------------------TELQAVQESKQRGR----- 357
            :|..| ||.|.......                             |.::..|..|:.|:     
Mouse   643 KFAQIASLSSAHQTQANPITWIQKLSCSENELCVPRLQDATGGQLGTSMENKQGFKEPGKERIGS 707

  Fly   358 --------IHKVFV-RSPSKRLLGAAGGVGTSGS---------------SG----------GTPM 388
                    :|.:.: :.|::.:.|.||....:||               ||          |.|.
Mouse   708 SPYTGGEQLHSIGLNQKPAQTVFGTAGHSMCAGSNCLGRRTQICCFDSVSGSQNSKRKGLFGEPN 772

  Fly   389 QQ------------------HSGSESANSHNN--------GKPA-------GAGTILTITKTS-- 418
            |.                  :.|.::..:.:.        |.||       ..|.||.:...|  
Mouse   773 QDIVCVMLKRDPVHGFGFVINEGEDAEQTRSGIFISSLIPGGPAERAKKIKPGGKILALNHISLE 837

  Fly   419 -------------RPHDNKVTSKEADSMPRKAWEQ-QSDEYDIQLDVGFIEQCTRRFESASPSPM 469
                         .|.|.::..    |.|:..... .|:|.:.....|..  ||....:......
Mouse   838 GFTFSMAVRMIQNSPDDMELII----SQPKGVCGTIHSEEKNSTASSGMF--CTDILSNRCQGRQ 896

  Fly   470 PPAYSSGQHSPILLPTTIADAVGHQQPE----SGSDLITIRLQADEQGRYGFNVKGGVDLSLP-- 528
            .|.......|  :..|.:|...|...|.    :..::..:.| ..|.|..||:|.||::.|:|  
Mouse   897 SPHIHDQDRS--VRGTEMAQGAGSCPPSPLQTNTGEIYFVEL-VKEDGTLGFSVTGGINTSVPHG 958

  Fly   529 -VQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVHGLRHEQVVAMIRDCRHQASGELLLTVRPQR 592
             :.|..::|..||.: ..::.:||.:|.::|..:.||.|:|.|..::.....|  .|:|..|..|
Mouse   959 GIYVKSIIPGGPAAK-EGQILQGDRLLQVDGVSLCGLTHKQAVQCLKGPGQVA--RLVLERRGPR 1020

  Fly   593 SAPLLLEEEPLYQYVPESDEIGSHSNLLDGDALFTQSLLLLSDGLASGALLA----QYELMYRKN 653
            :||          ..|.:|:       ..||.....||:....|..:.::..    ::|:..:||
Mouse  1021 AAP----------QCPSADD-------RMGDVHMAVSLVTARPGRPASSVSVTDGPKFEVKLKKN 1068

  Fly   654  653
            Mouse  1069  1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 52/211 (25%)
FERM_N 38..102 CDD:286467 13/71 (18%)
FERM_M 125..232 CDD:278785 31/113 (27%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 27/103 (26%)
FA 333..369 CDD:285894 9/78 (12%)
PDZ_signaling 502..589 CDD:238492 26/89 (29%)
Y_phosphatase 666..955 CDD:278528
PTPc 668..955 CDD:238006
Frmpd2XP_036014873.1 PKc_like 6..188 CDD:419665
Ubiquitin_like_fold 329..422 CDD:421700 22/98 (22%)
B41 334..538 CDD:214604 51/208 (25%)
PH-like 534..635 CDD:418428 27/105 (26%)
PDZ_signaling 775..859 CDD:238492 10/83 (12%)
PDZ 930..1018 CDD:214570 26/91 (29%)
PDZ 1061..1150 CDD:214570 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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