DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg and Mylip

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_722484.2 Gene:Mylip / 218203 MGIID:2388271 Length:445 Species:Mus musculus


Alignment Length:381 Identity:107/381 - (28%)
Similarity:180/381 - (47%) Gaps:50/381 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 DDITHTFRIEKRAKGSELLDQVFQYLELSERDYFGLLFPQKPGDVVRWVDAQKQFKKQCSSVSLD 106
            |.:.....:|.:|.|.:.|:||.:.|.:.|.|||||.|....|:.: |::.:.:..:|     :|
Mouse     9 DAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESL-WLNLRNRISQQ-----MD 67

  Fly   107 NDAVPLLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRNILLGKLPCSSNTQCLLASYTVQSELGDF 171
            ..|...|:.|||||| :|..:.:|.||:.|:|.||.::|.|.|.||......|::...|::.||:
Mouse    68 GLAPYRLKLRVKFFV-EPHLILQEQTRHIFFLHIKESLLAGHLQCSPEQAVELSALLAQTKFGDY 131

  Fly   172 NALEHQPGYLSGMQLLCDQ--TTEAERKVGELHKLHRGQLPADAEYNYLEHAKRLELYGIDLHRA 234
            |....|..|    :.||::  ::.....:...||...|...|.|||..|:....:|.|||:.|..
Mouse   132 NQNTAQYSY----EDLCEKELSSSTLNSIVAKHKELEGISQASAEYQVLQIVSAMENYGIEWHAV 192

  Fly   235 TDSNGKELQLGVSAVGLLVFQHSLR-VNTFSWSKMVKVSFKRKDFFIQLRREPSENYDTLLGFGM 298
            .||.|::|.:||...|:.:.:.... :|..::..:...:...|:.::.:.:| |.|...|| |.|
Mouse   193 RDSEGQKLLIGVGPEGISICKEDFSPINRIAYPVVQMATQSGKNVYLTVTKE-SGNSIVLL-FKM 255

  Fly   299 SSHKHAKALWKSCVEHHSFFRLK--------------RPHRLSRFL--NISLGSKFYYSGRTELQ 347
            .|.:.|..|:::..|.|:|:|..              :.|..|.||  ||:||.|:.:..:    
Mouse   256 ISTRAASGLYRAITETHAFYRCDTVTSAVMMQYSRDLKGH
LASLFLNENINLGKKYVFDIK---- 316

  Fly   348 AVQESKQRGRIHKVFVRSPSKRLLGAAGGVG----TSGSSGGTPMQQHSGSESANS 399
              :.||:        |...::|.|..||.|.    :..|...:|::....|.|.:|
Mouse   317 --RTSKE--------VYDHARRALYNAGVVDLVSRSDQSPPSSPLKSSDSSMSCSS 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 61/191 (32%)
FERM_N 38..102 CDD:286467 18/59 (31%)
FERM_M 125..232 CDD:278785 33/108 (31%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 26/94 (28%)
FA 333..369 CDD:285894 6/35 (17%)
PDZ_signaling 502..589 CDD:238492
Y_phosphatase 666..955 CDD:278528
PTPc 668..955 CDD:238006
MylipNP_722484.2 B41 5..190 CDD:214604 61/191 (32%)
FERM_N 5..67 CDD:286467 18/63 (29%)
FERM_M 85..190 CDD:278785 33/108 (31%)
FERM_C_MYLIP_IDOL 185..295 CDD:270016 27/111 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..363 5/23 (22%)
zf-C3HC4_3 383..428 CDD:290631
Critical for homodimerization. /evidence=ECO:0000250 431..433
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.