DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and Sntb2

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_001355245.1 Gene:Sntb2 / 20650 MGIID:101771 Length:531 Species:Mus musculus


Alignment Length:512 Identity:102/512 - (19%)
Similarity:166/512 - (32%) Gaps:201/512 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   462 ESASPSPMPPAYS-------SGQHSPILLPTTIADAVGHQQP-----------ESGSDLITIRLQ 508
            ::|:..|.|||.:       .|..|   ||.:....:|...|           .:...:..:|:.
Mouse    38 DAAAVEPEPPAAAFNGLPNGGGGES---LPGSPNRGLGPPSPPAPPRGPAGEASASPPVRRVRVV 99

  Fly   509 ADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVHGLRHEQVVAMI 573
            ..|.|..|.::|||.:..:|:.:||:.|...||: :..:..||.:|.:||.|:....|:|.|..:
Mouse   100 KQEAGGLGISIKGGRENRMPILISKIFPGLAADQ-SRALRLGDAILSVNGTDLRQATHDQAVQAL 163

  Fly   574 RDCRHQASGELLLTVR------PQRSAPLLLEEEPLYQYVPE------SDEIGS----------- 615
            :    :|..|:||.|:      |....|.|:.:.|.....|:      |::.||           
Mouse   164 K----RAGKEVLLEVKFIREVTPYIKKPSLVSDLPWEGASPQSPSFSGSEDSGSPKHQNTTKDRK 224

  Fly   616 ---------------------------------------------------HSNLLDGDALFTQS 629
                                                               |:|::   ||..|.
Mouse   225 VIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLILRCKDTATAHSWFVAIHTNIM---ALLPQV 286

  Fly   630 L-----LLLSDGLASGA--------LLAQYEL---MYRKNPDL-AITEARKPANAPKNRYRDISP 677
            |     :|.:...|.|:        |..|.:|   ..:..|.| |:||            :|:..
Mouse   287 LAELNAMLGATSTAGGSKEVKHIAWLAEQAKLDGGRQQWRPVLMAVTE------------KDLLL 339

  Fly   678 YDC---TR--------------VSLVNSLTGDYINANYVNMEIPGGAVNRYIATQ-GPLASTTTD 724
            |||   ||              ..||:|.:|         ...|....:...||: |........
Mouse   340 YDCMPWTRDAWASPCHSYPLVATRLVHSGSG---------CRSPSLGSDLTFATRTGSRQGIEMH 395

  Fly   725 FWRMVQQESSHLLVMLTTVMESGRQKCH-----------QYWP----------VTGEELQLAEGF 768
            .:|:   |:...|...|.::..|   ||           .|.|          :....::.:...
Mouse   396 LFRV---ETHRDLSTWTRILVQG---CHAAAELIKEVSLDYGPAFLSKADCICIAHVLIRQSHSH 454

  Fly   769 SVRCLSEKPDETGSFVFREF-VLKD---------KHEQRHIHHMQYLAWPDHCVPSD 815
            ...|:|.|.:|....|.|.. ..||         ||:|:.:     |..|..|:|.|
Mouse   455 GTACVSSKSEERALTVTRSISTSKDEKKEKATTKKHKQKPL-----LLPPSQCLPED 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492 26/86 (30%)
Y_phosphatase 666..955 CDD:278528 39/199 (20%)
PTPc 668..955 CDD:238006 39/197 (20%)
Sntb2NP_001355245.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..95 9/52 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..220 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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