DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and Rdx

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_001098086.1 Gene:Rdx / 19684 MGIID:97887 Length:583 Species:Mus musculus


Alignment Length:501 Identity:129/501 - (25%)
Similarity:208/501 - (41%) Gaps:99/501 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FRIEKRAKGSELLDQVFQYLELSERDYFGLLFPQKPGDVVRWVDAQKQFKKQCSSVSLDNDAVPL 112
            |.|:....|.:|.|||.:.:.|.|..:|||.:....| ...|:...|:..:|  .|..:|   ||
Mouse    18 FAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKG-YSTWLKLNKKVTQQ--DVKKEN---PL 76

  Fly   113 -LEFRVKFFVSDPS-RLQEEFTRYQFYLQIKRNILLGKLPCSSNTQCLLASYTVQSELGDFNALE 175
             .:||.|||..|.| .|.:|.|:..|:||:|..||..::.|...|..|||||.||::.||:|...
Mouse    77 QFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAKYGDYNKEI 141

  Fly   176 HQPGYLSGMQLLCDQTTEA--------ERKVGELHKLHRGQLPADAEYNYLEHAKRLELYGIDLH 232
            |:||||:..:||..:..|.        |.::...|:.|||.|..|:...||:.|:.||:||::..
Mouse   142 HKPGYLANDRLLPQRVLEQHKLTKEQWEERIQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYF 206

  Fly   233 RATDSNGKELQLGVSAVGLLVFQHSLRVNT---FSWSKMVKVSFKRKDFFIQLRREPSENY---- 290
            ...:..|.||.|||.|:||.:::|..::..   |.||::..:||..|.|.|:...:.:.::    
Mouse   207 EIKNKKGTELWLGVDALGLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYA 271

  Fly   291 ------DTLLGFGMSSH------------------------KHAKALWKSCVEHHSFFR---LKR 322
                  ..:|...|.:|                        ||.|.|.::.:|:....|   .|.
Mouse   272 PRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERAQLENEKKKREIAEKE 336

  Fly   323 PHRLSR-------------FLNISLGSKFYYSGRTELQAVQESKQRGRIHKVFVRSPSKRLLGAA 374
            ..|:.|             ...:....:.....|..|:..|| :||       .:..::||....
Mouse   337 KERIEREKEELMERLRQIEEQTVKAQKELEEQTRKALELEQE-RQR-------AKEEAERLDRER 393

  Fly   375 GGVGTSGSSGGTPMQQHSGSESANSHNNGKPAGAGTILTITKTSRPHDNKVTSKEADSMPRKAWE 439
            .....:.|:        ...::|:...|.:...|.......|.:...:.|...:|      :|.|
Mouse   394 RAAEEAKSA--------IAKQAADQMKNQEQLAAELAEFTAKIALLEEAKKKKEE------EATE 444

  Fly   440 QQSDEYDIQLDVGFIEQCTRRFESASPSPMPPAYSSGQHSPILLPT 485
            .|...:..|.|:...::..:...||.|.|.||        |::.||
Mouse   445 WQHKAFAAQEDLEKTKEELKTVMSAPPPPPPP--------PVIPPT 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 70/193 (36%)
FERM_N 38..102 CDD:286467 16/53 (30%)
FERM_M 125..232 CDD:278785 44/115 (38%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 29/133 (22%)
FA 333..369 CDD:285894 6/35 (17%)
PDZ_signaling 502..589 CDD:238492
Y_phosphatase 666..955 CDD:278528
PTPc 668..955 CDD:238006
RdxNP_001098086.1 B41 7..206 CDD:214604 70/193 (36%)
Phosphatidylinositol binding 60..63 0/2 (0%)
FERM_C_ERM 200..296 CDD:270015 23/95 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..333 6/22 (27%)
ERM 347..583 CDD:307079 29/166 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 376..407 7/46 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 437..530 15/60 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 536..555
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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