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Protein Alignment Ptpmeg and Ptprj

DIOPT Version :9

Sequence 1:	NP_001163309.2	Gene:	Ptpmeg / 38059	FlyBaseID:	FBgn0261985	Length:	974	Species:	Drosophila melanogaster
Sequence 2:	XP_006499054.1	Gene:	Ptprj / 19271	MGIID:	104574	Length:	1351	Species:	Mus musculus

Alignment Length:	378	Identity:	115/378 - (30%)
Similarity:	165/378 - (43%)	Gaps:	105/378 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   588 VRPQRSAPLLLEEEPLYQYVPESDEIGSHSNLLDGDALFTQSLLLLSDGLASGALLAQYELMYRK 652
            ::|::|..:.:|....|....::|     ||.  |.|...:.|.|:      |..|.:|
Mouse  1027 IKPKKSKLIRVENFEAYFKKQQAD-----SNC--GFAEEYEDLKLI------GISLPKY------ 1072

  Fly   653 NPDLAITEARKPANAPKNRYRDISPYDCTRV--SLVNSLTGDYINANYVNMEIPG-GAVNRYIAT 714
                   .|....|..||||.::.|||.:||  |:....|.|||||||    :|| .:...:|||
Mouse  1073 -------TAEIAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANY----MPGYHSKKDFIAT 1126

  Fly   715 QGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWPVTGEELQLAEGFSVRCLSE--KP 777
            ||||.:|..||||||.:::.:.:||||..:|.||.||.:|||  .::.|.....:|...||  .|
Mouse  1127 QGPLPNTLKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWP--SKQAQDYGDITVAMTSEVVLP 1189

  Fly   778 DETGSFVFREFVLK-----DKHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQE 837
            :.|    .|:||:|     :.|..|..|   :.:||||.||...:|.:.|...||
Mouse  1190 EWT----IRDFVVKNMQNSESHPLRQFH---FTSWPDHGVPDTTDLLINFRYLVR---------- 1237

  Fly   838 IEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDETPVSTSVHQCISAANPPVIVHCSAG 902
              :.:||:                           .||.                 |::||||||
Mouse  1238 --DYMKQI---------------------------PPES-----------------PILVHCSAG 1256

  Fly   903 IGRTGVLILMDTALALMEAREPVYPLDIVRTMRDQRACMVQNVSQYRFVCECI 955
            :||||..|.:|..:..:|....|....||..:|..|..|||...||.|:.:|:
Mouse  1257 VGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCV 1309

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.