DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and exc-5

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_001294029.1 Gene:exc-5 / 177692 WormBaseID:WBGene00001366 Length:861 Species:Caenorhabditis elegans


Alignment Length:454 Identity:83/454 - (18%)
Similarity:149/454 - (32%) Gaps:157/454 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   470 PPAYSSGQHSP---------ILLPTTIADAVGH--QQPESGSDLITIRLQA--DEQGRYGFNVKG 521
            ||.:....|.|         ..:|:.:|..:..  |.|...|....:...|  :.|.....:::|
 Worm     6 PPPFFKQMHYPHGPQSNEWNDFVPSFLAPKMSSLVQLPSQPSSAFQLDFDAVRNFQNVPPVDLEG 70

  Fly   522 G--VDLSLPVQVSKVVPHTPADRCTPRV-----CEGDEVLMINGRDVHGLRHEQVVAMIR----- 574
            |  :|.:...::.      |.|.||.||     ...||:             |::...:|     
 Worm    71 GTLIDATEEEEID------PVDGCTVRVFTYRILSADEM-------------EELTKTVRQKIKF 116

  Fly   575 DCRH------QASGELLLTVRPQRSAPLLLEEEPLYQYVPESDEI--GSHSNLLDGDALFTQSLL 631
            ||..      ....|..:..:.||.:..:...:|: ::...|.:|  ..||..||.:....|.:.
 Worm   117 DCTQTMRSLKMIGSEANVVEKSQRISGDIKGMKPI-EFSNNSKQICLDQHSLQLDPNDEQDQQIS 180

  Fly   632 LLSDGLASG--ALLAQYELMYRKNPDLAITEARKPANAPKNRYRDISPYDCTRVSLVNSLTGDYI 694
            .:.:.:.:.  :||::.:.|:.|                  .|.::.....|..||:.|.|.:.|
 Worm   181 RVLNQVPNTFMSLLSREKDMFVK------------------LYPELFEKMRTESSLIPSTTTEII 227

  Fly   695 NANYVNMEIPGGAVNRYIATQGPLASTTTDFWRMVQQESSHLL---VMLTTVMESGRQKCHQY-- 754
            .                    .|..||||.. :..:..|||..   ..:..|.:..:.|...:  
 Worm   228 T--------------------NPDGSTTTRV-KSSKSYSSHFSRQETYVNGVKKMSKSKFRAFVE 271

  Fly   755 --WPVTGEELQLAEG----------------FSVRCLSE---KPDETGS--------------FV 784
              .|..|.:::|::|                .|..|.||   :.|.||.              :.
 Worm   272 YKGPDGGFQVKLSDGDEFELSEDEQEDDDTSLSQSCYSEIDSESDITGPSPKTDLDKRYQKAWYA 336

  Fly   785 FREFVLKDKHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLM 848
            .:|.|   ..|||::..::.|.          :.|          |||.:.:|:..:.|..||:
 Worm   337 AKELV---DSEQRYVDKLKLLG----------DTF----------RNRLIKEELITNDKITRLL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492 18/106 (17%)
Y_phosphatase 666..955 CDD:278528 42/223 (19%)
PTPc 668..955 CDD:238006 42/221 (19%)
exc-5NP_001294029.1 RhoGEF 336..514 CDD:279015 14/65 (22%)
PH 545..647 CDD:278594
PH1_FGD1-4_like 545..643 CDD:275423
FYVE 676..727 CDD:214499
PH-like <773..845 CDD:302622
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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