DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and ptp-5.1

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_500733.2 Gene:ptp-5.1 / 177291 WormBaseID:WBGene00016053 Length:482 Species:Caenorhabditis elegans


Alignment Length:607 Identity:110/607 - (18%)
Similarity:191/607 - (31%) Gaps:211/607 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 GTPMQQHS----GSESANSHNNG----KPAGAGTILTITKTSRPHDNKVTSKEADSMPRKAWEQQ 441
            ||..::.|    |...:.:..||    ||.|..|... .|.||.:|:|....|..:..:||    
 Worm     6 GTKNKKRSKNKDGKLMSTASRNGDEATKPNGTKTSKK-RKPSRGNDDKGREPEPTAQSKKA---- 65

  Fly   442 SDEYDIQLDVGFIEQCTRRFESASPSPMPPAYSSGQHSPIL----------LPTTIADAVGHQQP 496
                         ::...:.:|.:||   ||.|.|....:.          .|..||.:|     
 Worm    66 -------------KKMKPKRDSKAPS---PALSPGPREQLSDQKKTVEDDPPPAPIATSV----- 109

  Fly   497 ESGSDLITIRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEGDEVLMINGRDV 561
             ||:                              |:..|...||               |...:|
 Worm   110 -SGT------------------------------VTSTVNAMPA---------------ILSSEV 128

  Fly   562 HGLRHEQVVAMIRDCRHQASGELLLTVRPQRSAPLLLEEEPLYQYVPESDEIGSHSNLLDGDA-- 624
            ...:.::|.:|                :..:.||....:.|:           ||...:.|:|  
 Worm   129 SNKQPKEVNSM----------------KKTKGAPNSTTDTPV-----------SHKTSITGNADK 166

  Fly   625 -LFTQSLLLLSDGLASGALLAQYELMYRKNPDLAITEARKPANAPKNRYRDISPYDCTRVSLVNS 688
             :.........|.:....:...:|.:.....|:........||:..|:.......|...:.:...
 Worm   167 WVGEDVAKTWMDSIDLAEVKKDFEKLQTMKIDIDKDCKTWKANSKLNQSEHFPALDSNLLKIEKG 231

  Fly   689 LTGDYINANYVNMEIPGGAVNRYIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQ 753
                |:|.::|  |:|.|. |.:|. |.|:..|...||:.|..:      .:|::......:..:
 Worm   232 ----YVNISHV--EVPLGR-NVHIG-QFPVKDTEETFWKAVFDK------RITSIDVLVGDEPIE 282

  Fly   754 YWPVTGEELQLAEGFSVRCLSEKP-----DETGSFVFREFVLKDKHEQRHIHHMQYLA-WPDHCV 812
            ::|...|:.   :.:....::.:.     ||.  |.|...||........|.::.... |....|
 Worm   283 FFPKKAEDY---KNYGQMWINNRKVEHVIDEV--FRFSIEVLPHGCSNSIICNVTVFGNWKVDSV 342

  Fly   813 PSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDE 877
            |            |:.|      ..|:|:|            ..|..|::          ||.|:
 Worm   343 P------------VKQA------IAIKEAL------------GLNYFLLK----------TPADD 367

  Fly   878 TPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALMEAR--EPVYPLDIVRTMRDQRAC 940
            ..:..|.|                |.||.|..:.:..|:..::.:  ||.. .|||:::|.||..
 Worm   368 NAMIISPH----------------GAGRAGYFLALAVAVHTIDTKIAEPNI-ADIVKSIRTQRPR 415

  Fly   941 MVQNVSQYRFVCECICAAYMKI 962
            .|.:..||       |:.|:.:
 Worm   416 AVDSFCQY-------CSLYISL 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492 8/86 (9%)
Y_phosphatase 666..955 CDD:278528 58/296 (20%)
PTPc 668..955 CDD:238006 57/294 (19%)
ptp-5.1NP_500733.2 PTPc 185..432 CDD:214550 63/329 (19%)
PTPc_motif 334..432 CDD:214649 33/161 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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