DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and ptp-1

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_497732.1 Gene:ptp-1 / 175463 WormBaseID:WBGene00004213 Length:1026 Species:Caenorhabditis elegans


Alignment Length:1083 Identity:398/1083 - (36%)
Similarity:555/1083 - (51%) Gaps:243/1083 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KTPQRQQ--CVTVLFLDDITHTFRIEKRAKGSELLDQVFQYLELSERDYFGLLF--------PQK 82
            |||...|  | ||.|||..::.|.|||.:.|..||::||.|||:.|:|||||:|        .||
 Worm    22 KTPPPNQIRC-TVTFLDSTSYHFEIEKNSLGIVLLEKVFNYLEIIEKDYFGLVFIAVDNSSAQQK 85

  Fly    83 PGDVVRWVDAQKQFKKQ--CSSVSLDNDAVPLLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRNIL 145
                 :|:|..|..:||  |....        |.|||||:|.||:||::||||:|||.|:::|:.
 Worm    86 -----KWLDPSKNLRKQMICPPYH--------LFFRVKFYVRDPNRLRDEFTRFQFYQQVRQNLE 137

  Fly   146 LGKLPCSSNTQCLLASYTVQSELGDFNALEHQPGYLSGMQLLC-----------DQTTEAERKVG 199
            .|:|||:..:..|||||.||:|:|||....|      ||...|           |..::   :|.
 Worm   138 EGRLPCNEGSLALLASYVVQAEVGDFEEKTH------GMSRTCLCYKIQFATLPDDFSD---RVA 193

  Fly   200 ELHKLHRGQLPADAEYNYLEHAKRLELYGIDLHRATDSNGKELQLGVSAVGLLVFQHSLRVNTFS 264
            |||:||.||.|..||.|:|:||:|||:||:|::...|:|...:::||.|||:.||...:::|.::
 Worm   194 ELHQLHIGQTPDVAEQNFLDHARRLEMYGMDVYDGVDANHLPIEIGVGAVGIKVFHEGIKMNEYA 258

  Fly   265 WSKMVKVSFKRKDFFIQLRREPSENYDTLLGFGMSSHKHAKALWKSCVEHHSFFRLKRPHRLSRF 329
            |.::.|:|||:|.|.:.:..|...: :|::.|.:.|.|..|.|||.|:|.|:|||||.|.:..:.
 Worm   259 WVRIRKLSFKKKQFQVLVANEDGVS-ETIMIFNIMSAKICKLLWKCCIEQHTFFRLKTPPKTPQR 322

  Fly   330 LNISLGSKFYYSGRTELQAVQESKQRGRI-HKVFVRSPSK------------------------- 368
            ...:.||||.||||||.|.::|::.|... |:.|.||.||                         
 Worm   323 KVFNFGSKFRYSGRTEYQTLEENEHRKSAGHRNFHRSLSKSSFLRSTFSGNTQSIDSSRYTNTTT 387

  Fly   369 ---------------RLLGAA---------------GGV-----------------GTSGSSGGT 386
                           |||.||               |.|                 .|...|...
 Worm   388 TDSPELPSSGQLLARRLLSAARHDTDSSDALGYASDGAVVCAPLTTPLSPRRTRDYATDSESSAP 452

  Fly   387 PMQQHSGSESA--------------------NSHNNGKPAGAGTILTITKTSRPHDNKVTSKEAD 431
            .::|...|:.|                    .|.:.|..|...::..::..|.|  |..:.|.|:
 Worm   453 SLRQQRLSKEAIYYGTQESCDEKSWTPSMACTSTSPGIHASTASVRPVSSGSTP--NGASRKSAN 515

  Fly   432 S---------MPRKAWEQQSDEYDIQLDVGFIEQCTRRFESASPSPMPP----AY--SSGQHSPI 481
            |         ..::.....:..|...|:.............|:...:||    ||  ||.::|..
 Worm   516 SGYSGYGYATQTQQPTSTTNASYSPYLNGTISRSSGAAVAKAAARGLPPTNQQAYNTSSPRNSVA 580

  Fly   482 LLPTTIADAVGHQQPES-------------GSD-LITIRLQADEQGRYGFNVKGGVDLSLPVQVS 532
            ...:..:..:|...|.|             |.| ::||:::.|..||:|||||||.|.:.||.||
 Worm   581 SYSSFASAGIGGSPPRSKRSPQSNKSSSPVGEDQVVTIKMRPDRHGRFGFNVKGGADQNYPVIVS 645

  Fly   533 KVVPHTPADRCTPRVCEGDEVLMINGRDVHGLRHEQVVAMIRDCRHQAS-GELLLTVRPQRSAPL 596
            :|.|.:.||:|.||:.|||:||.|:||||..:.|:.||..||..|...: |||.||:||  :...
 Worm   646 RVAPGSSADKCQPRLNEGDQVLFIDGRDVSTMSHDHVVQFIRSARSGLNGGELHLTIRP--NVYR 708

  Fly   597 LLEE--EPLYQYVPESDEIGSHSNLLDGDALFTQSLLLLSDGLASGALLAQYELMYRKNPDLAIT 659
            |.||  ||....|||...:.  .::.:.|.| ::||.||:|.|.||.::..:|::|||.|.:::.
 Worm   709 LGEEVDEPDSTMVPEPARVA--DSVPNSDKL-SKSLQLLADSLNSGKVVDHFEMLYRKKPGMSMN 770

  Fly   660 EARKPANAPKNRYRDISPYDCTRVSLVNSLTGDYINANYVNMEIP-GGAVNRYIATQGPLASTTT 723
            ..|..||..||||||:.|||.|||:|..|.:|||||||||||||| .|.||||||.|||||.|::
 Worm   771 ICRLTANLAKNRYRDVCPYDDTRVTLQASPSGDYINANYVNMEIPSSGIVNRYIACQGPLAHTSS 835

  Fly   724 DFWRMVQQESSHLLVMLTTVMESGRQKCHQYWPVTGEELQLAEGFSVRCLSEKPDETGSFVFREF 788
            |||.||.::....:|||||:.|.||.|||||||...|..:... ..::|:.:|  :|.:..:|||
 Worm   836 DFWVMVWEQHCTTIVMLTTITERGRVKCHQYWPRVFETQEYGR-LMIKCIKDK--QTTNCCYREF 897

  Fly   789 VLKDKH--EQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDAD 851
            .::|::  |:|.:..|||:|||||.||.||..|::|.:.||.||..::                 
 Worm   898 SIRDRNSSEERRVTQMQYIAWPDHGVPDDPKHFIQFVDEVRKARQGSV----------------- 945

  Fly   852 ADADENGGLMRERKCAASNGATPEDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTAL 916
                                                     .|::||||||||||||||||:||.
 Worm   946 -----------------------------------------DPIVVHCSAGIGRTGVLILMETAA 969

  Fly   917 ALMEAREPVYPLDIVRTMRDQRACMVQNVSQYRFVCECICAAY 959
            .|:|:.|||||||||||||||||.::|...||.||||.|..||
 Worm   970 CLVESNEPVYPLDIVRTMRDQRAMLIQTPGQYTFVCESILRAY 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 94/217 (43%)
FERM_N 38..102 CDD:286467 31/73 (42%)
FERM_M 125..232 CDD:278785 52/117 (44%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 34/93 (37%)
FA 333..369 CDD:285894 19/76 (25%)
PDZ_signaling 502..589 CDD:238492 45/87 (52%)
Y_phosphatase 666..955 CDD:278528 135/291 (46%)
PTPc 668..955 CDD:238006 134/289 (46%)
ptp-1NP_497732.1 B41 30..226 CDD:214604 94/218 (43%)
FERM_N 33..100 CDD:286467 30/71 (42%)
FERM_M 117..226 CDD:278785 52/117 (44%)
FERM_C_PTPN4_PTPN3_like 220..313 CDD:270010 34/93 (37%)
FA 323..362 CDD:285894 17/38 (45%)
PDZ_signaling 615..703 CDD:238492 45/87 (52%)
PTPc 752..1010 CDD:214550 143/318 (45%)
PTPc 780..1009 CDD:238006 134/289 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156671
Domainoid 1 1.000 203 1.000 Domainoid score I1742
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2120
Inparanoid 1 1.050 590 1.000 Inparanoid score I537
Isobase 1 0.950 - 0 Normalized mean entropy S3284
OMA 1 1.010 - - QHG49050
OrthoDB 1 1.010 - - D59173at33208
OrthoFinder 1 1.000 - - FOG0006212
OrthoInspector 1 1.000 - - oto18849
orthoMCL 1 0.900 - - OOG6_104957
Panther 1 1.100 - - LDO PTHR45706
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5775
SonicParanoid 1 1.000 - - X1974
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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