DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and Y48G9A.9

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_001022893.1 Gene:Y48G9A.9 / 175343 WormBaseID:WBGene00021702 Length:361 Species:Caenorhabditis elegans


Alignment Length:386 Identity:104/386 - (26%)
Similarity:154/386 - (39%) Gaps:117/386 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   602 PLYQY--VPES----------------DEIGSHSNLLDGDALFTQSLLLLSDGLASGALLAQYEL 648
            |:||:  .|::                |....:...|:...:.|:.|.:  :|||.         
 Worm    21 PIYQFFEAPDANNNYDENEHKIYKKTDDHHRKYVETLNNFIIATEKLGI--EGLAK--------- 74

  Fly   649 MYRK---NPDLAITEARKPANAPKNRYRDISPYDCTRVSLV--NSLTGDYINANYVNMEIPGGAV 708
            .|||   ..|.::|......|..||||.|:...|.|||.|.  .|...|||:||||....   ..
 Worm    75 QYRKLDAQQDSSLTFEAFKQNMHKNRYSDVVCRDTTRVKLTIDKSRYEDYIHANYVKTNY---LR 136

  Fly   709 NRYIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWPVTGEELQLAEGFS---V 770
            |.:|.|||||..|..|||||:.||.:..::||...||.||.||..|||..|    :.|.:.   |
 Worm   137 NTFICTQGPLQHTIIDFWRMIFQERAESILMLCKTMEEGRPKCVGYWPSLG----VTETYGCIRV 197

  Fly   771 RCLSEKPDE------TGSFVFREFVLKDKH----EQRHIHHMQYLAWPDHCVPSDPNLFLEFTER 825
            ..:.|..||      ..:|| .:.|..|:.    ::..::.:::..|||..||.:          
 Worm   198 TNMGESSDEFEICNLAVTFV-PDNVPVDEQPANLKELRVNLIKWPNWPDRGVPDE---------- 251

  Fly   826 VRAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDETPVSTSVHQCISA 890
                :..|:.|.:   |.|||                                            
 Worm   252 ----KCHTVPQRL---LAQVR-------------------------------------------- 265

  Fly   891 ANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYPLDIVRTMRDQRACMVQNVSQYRFV 951
             :.|.:|||||||||||.::.::.|...::....|...:|:..:|.|||..:|...||.::
 Worm   266 -HGPCVVHCSAGIGRTGCVVALEFAYNKLDRGLKVDFEEIITELRKQRAQCIQTEIQYLYI 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492
Y_phosphatase 666..955 CDD:278528 88/301 (29%)
PTPc 668..955 CDD:238006 87/299 (29%)
Y48G9A.9NP_001022893.1 PTPc 71..330 CDD:214550 96/334 (29%)
PTPc 97..330 CDD:238006 87/299 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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