DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and C33F10.8

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_494864.2 Gene:C33F10.8 / 173829 WormBaseID:WBGene00016356 Length:463 Species:Caenorhabditis elegans


Alignment Length:390 Identity:78/390 - (20%)
Similarity:134/390 - (34%) Gaps:95/390 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 GRDVHGLRHEQVVAMIRDCRHQASGELLLTVRPQRSAPLLLEEEPL--YQYVPESDEIGSHSNLL 620
            ||...|....:|:..:|....:|..||..|  ..::.....|:|.:  .:|:...|::....|..
 Worm    87 GRKKAGENLNEVMKHLRAPTPRAQQELEKT--NWKTTTTETEDEDVAGQKYIKFMDQVAFIENGT 149

  Fly   621 DGDALFTQSLLLLSDGLASGALLAQYELMYRKNPDLAITEARKPANAPKNRYRDISPYDCTRVSL 685
            .....|:..|:.::....|.|.                     ..|..||:.:|:...|.|||.|
 Worm   150 TLSTFFSNHLMNIAPTSRSDAF---------------------HGNTFKNQRKDVPCIDDTRVKL 193

  Fly   686 VNSLTGDYINANYVNMEIPGGAVNRYIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQK 750
            .:.....||:||::..:   .....||.||.||..|..|||.||..:....:|.||:...:....
 Worm   194 ADPNIVYYIHANHIMFD---HLKKTYITTQHPLPGTLNDFWAMVADQKVETIVSLTSSSSASNPN 255

  Fly   751 CH-QYWPVTGEELQLAEGFSVRCLSEKPDET----GSFVFREFVLKDKHEQRHIHHMQYLAWPDH 810
            .: .|:|...|.......|.|.|.:....:|    ..:.|...|..|..|:|.:....|..|..:
 Worm   256 VYPMYYPNKPETFNNFGQFFVYCKTVTQPKTKYGCKEYKFELVVQADNEERRSVRLYHYPHWTKN 320

  Fly   811 CVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATPE 875
            .||:...:.|...:::...:::.                                          
 Worm   321 MVPASSKVVLNLVKKIGKKKSQA------------------------------------------ 343

  Fly   876 DETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYPLDIV-RTMRDQRA 939
                              ||:|.|..|:.::..|:.:| |:..:..|:.....|:: |.||.|:|
 Worm   344 ------------------PVVVQCETGVNQSAELVFVD-AMCTLLTRQVEVNFDVLFRQMRSQKA 389

  Fly   940  939
             Worm   390  389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492 9/30 (30%)
Y_phosphatase 666..955 CDD:278528 60/280 (21%)
PTPc 668..955 CDD:238006 59/278 (21%)
C33F10.8NP_494864.2 PTPc 164..406 CDD:214550 62/311 (20%)
PTPc 177..400 CDD:238006 59/277 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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