DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and F47B3.1

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_491278.1 Gene:F47B3.1 / 171984 WormBaseID:WBGene00018525 Length:363 Species:Caenorhabditis elegans


Alignment Length:334 Identity:94/334 - (28%)
Similarity:145/334 - (43%) Gaps:84/334 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   641 ALLAQYELMYRKNPDLAITEARKPANAPKNRYRDISPYDCTRVSL-VNSLTGDYINANYVNMEIP 704
            ||:.::.::.:..|:...|||.. ||..||||:|:...|..|:.: ...|..|||:|||:     
 Worm    69 ALVDEFRVLAKWTPEGMTTEAFS-ANTDKNRYQDVPCQDKGRIVVKFPGLASDYIHANYL----- 127

  Fly   705 GGAVN--RYIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWPV-TGEELQLAE 766
            |.|.|  ::|..||||.:|...||.|..||....::||...:|:|:.|||||||: .|::|...|
 Worm   128 GTATNPKKFICAQGPLENTQHSFWAMAIQEKVECVIMLCNCIETGKIKCHQYWPLEQGQKLVFGE 192

  Fly   767 G---FSVRCLSEK---PDETGSFVFREFVLKDKHEQ--RHIHHMQYLAWPDHCVPSDPNLFLEFT 823
            .   .||..|..|   |||.   ......||....|  |.|.|:|:..|||..||          
 Worm   193 APNTISVANLGAKKMAPDEQ---CINVTTLKVDWGQGSRTIQHLQWENWPDRGVP---------- 244

  Fly   824 ERVRAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDETPVSTSVHQCI 888
                           :.:|..:.|:.| ...::|                               
 Worm   245 ---------------QTNLTAINLLSA-TRGNQN------------------------------- 262

  Fly   889 SAANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYPL-DIVRTMRDQRACMVQNVSQYRFVC 952
                 |::|||||||||||.::.:......|.|.|....: ::::.:|..|...:||..||.::.
 Worm   263 -----PILVHCSAGIGRTGTIVAIAYVQDKMMAGENCMAMNELIKELRSHRPWSIQNEFQYLYLH 322

  Fly   953 ECICAAYMK 961
            ..:.:.:::
 Worm   323 RVLLSYFLE 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492
Y_phosphatase 666..955 CDD:278528 87/301 (29%)
PTPc 668..955 CDD:238006 86/299 (29%)
F47B3.1NP_491278.1 Y_phosphatase 93..326 CDD:278528 87/302 (29%)
PTPc 95..326 CDD:238006 86/300 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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