DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and Y71F9AL.4

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:NP_491071.1 Gene:Y71F9AL.4 / 171861 WormBaseID:WBGene00022110 Length:557 Species:Caenorhabditis elegans


Alignment Length:580 Identity:118/580 - (20%)
Similarity:194/580 - (33%) Gaps:215/580 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 NKVTSKEADSMPRKAWEQQSDEYDIQLD-VGFIEQCTRRFESASPSPMPPAYSSGQHSPILLPTT 486
            :|.|.|:.|...:...:::.||....|: ...:||.. ..|:...|.:.|..::|:..|      
 Worm    67 SKPTGKKRDEKRKSVSKEEDDEKPAPLERQRSVEQIA-NMENTPESVLKPPDNNGKPKP------ 124

  Fly   487 IADAVGHQQPESGSDLITIRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEGD 551
                 .|::.                                   :||..:           :.|
 Worm   125 -----SHEKD-----------------------------------AKVKKN-----------DDD 138

  Fly   552 EVLMINGRDVHGLRHEQVVAMIRDCRHQASGELLLTVRPQRSAPLLLEEEPLYQYVPESDEIGSH 616
            :.|....:|:.....||...||   :..||..::.|  ||             |...|...:|: 
 Worm   139 DDLGSEKKDLEPKEKEQRAEMI---KKWASAVMMST--PQ-------------QLTKEYKAVGN- 184

  Fly   617 SNLLDGDALFTQSLLLLSDGLASGALLAQYELMYRKNPDLAITEARKPANAPKNRYRDISPYDCT 681
                           ::||...:..|         |..||             |||.:|..:|..
 Worm   185 ---------------IVSDSECTAFL---------KFKDL-------------NRYPNIQCWDRG 212

  Fly   682 RVSLVNSLTGD---YINANYVNM-EIPGGAVNRYIATQGPLASTTTDFWRMVQQESSHLLVMLTT 742
            |.    :|.||   ||:||:|.: ..|    .|::.||||:.:|.|.||:|.....|..::||..
 Worm   213 RF----TLAGDENFYIHANFVKICTKP----ERFVCTQGPMENTCTHFWQMALSLGSTSIIMLCG 269

  Fly   743 VMESGRQKCHQY-WPVTG-EELQLAEGFSVRC----LSEKPDETGSFVFREFVLKDKHEQRHIHH 801
            .:|.|.:||.:| ..:.| ..|:....::..|    :..|..:..:....:.|:|...::..::|
 Worm   270 FVEDGSEKCAKYISDIVGFVNLEDHRVYTEYCTEIEIGGKSKDKITHRVLKVVVKATGQESKLNH 334

  Fly   802 MQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKC 866
            .|:.:||||.:|...:..|                         ||:.|         :.:::| 
 Worm   335 YQWASWPDHGMPDSCDTAL-------------------------RLLSA---------VKKDKK- 364

  Fly   867 AASNGATPEDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYPLDIV 931
                                       |||.|||||:||||.|.|:::.:|.:.........|..
 Worm   365 ---------------------------PVIAHCSAGVGRTGTLALIESMIAALRHPRKQNVKDSF 402

  Fly   932 RTMRDQRACMVQNVSQYRFVCECIC--------------------AAYMKISRSSAAIND 971
            ..:|..||..||...||.:...|:.                    ..|.||......|.|
 Worm   403 VLLRKDRARSVQTFPQYVYALRCVLEFLYSKGLYKRNEQEWTKFKETYAKIKAKKLKIKD 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492 12/86 (14%)
Y_phosphatase 666..955 CDD:278528 74/298 (25%)
PTPc 668..955 CDD:238006 74/296 (25%)
Y71F9AL.4NP_491071.1 PTPc 177..428 CDD:214550 83/358 (23%)
PTPc 199..428 CDD:238006 77/311 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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