Sequence 1: | NP_001163309.2 | Gene: | Ptpmeg / 38059 | FlyBaseID: | FBgn0261985 | Length: | 974 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_490886.2 | Gene: | tln-1 / 171736 | WormBaseID: | WBGene00006771 | Length: | 2553 | Species: | Caenorhabditis elegans |
Alignment Length: | 1059 | Identity: | 202/1059 - (19%) |
---|---|---|---|
Similarity: | 332/1059 - (31%) | Gaps: | 329/1059 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 FERFRLNN-----------LTRTFRLRGGGPELARDKKTPQRQQCVTV-------------LFLD 42
Fly 43 DIT----------------HTFRIEK-------------------RAKGSELLDQVFQYLELSER 72
Fly 73 DYFGLLFPQKPGDVVRWVDAQKQFKKQCSSVSLDNDAVPLLEFRVKFFVS-------DPSRLQEE 130
Fly 131 FTRYQFYLQIKRNILLGKLPCSSNTQCLLASYTVQSELGDFNALEHQPGYLSGMQLLCDQ---TT 192
Fly 193 EAERKVGELHKLHRGQLPADAEYNYLEHAKRLELYGIDLHRATDSNGKELQLGVSAVGLLVFQHS 257
Fly 258 LRVNTFSWSKMVKVSFKRKDFFIQLRREPSEN--YDTLLGFGMSSHKHAKALWKSCVEHHSFFRL 320
Fly 321 KRPHRLSRFLNISLG--SKFYYS-----GRTELQAVQE------SKQRGRIHKVF---------- 362
Fly 363 -VRSPSKRLLGAAGGVGTSGSSGGTPMQQHSGSESANSHNNGKPAGAGTILTITKTSRPH----- 421
Fly 422 ----------DNKVTSKEADSMPRKAWEQQSDEYDIQLDVGFIEQCTRRFESASPSPMPPAYSSG 476
Fly 477 QHSPILLPTTIADAVGHQQ---PESGSDLITIRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHT 538
Fly 539 PADRCTPRVCEGDEVLMI---------NGRDV-----HGLRHEQVVAMIRDCRHQASGELLLTVR 589
Fly 590 PQRSAPLLLEEEPLYQYVPESDEIGSH-SNLL----DGDALFTQSLLLLSDGLASGALLAQYELM 649
Fly 650 YR---KNPDLAITEARKPANAPKNRYRDISPYDCTRVSLVNSLTGDYINANYVNMEIPGGAVNRY 711
Fly 712 IATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQ------------KCHQYWPVTGEELQL 764
Fly 765 AEGFSVR-----CLSEKPDETGSFVFREFVLKDKHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTE 824
Fly 825 RVRAARNRTLL--QEIEESLKQVRLMDADADADENGG--------------LMRERKCAASNGAT 873
Fly 874 PEDETPVSTSVHQCISAAN 892 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptpmeg | NP_001163309.2 | B41 | 35..232 | CDD:214604 | 51/254 (20%) |
FERM_N | 38..102 | CDD:286467 | 15/111 (14%) | ||
FERM_M | 125..232 | CDD:278785 | 28/109 (26%) | ||
FERM_C_PTPN4_PTPN3_like | 226..320 | CDD:270010 | 11/95 (12%) | ||
FA | 333..369 | CDD:285894 | 11/59 (19%) | ||
PDZ_signaling | 502..589 | CDD:238492 | 22/100 (22%) | ||
Y_phosphatase | 666..955 | CDD:278528 | 58/260 (22%) | ||
PTPc | 668..955 | CDD:238006 | 57/258 (22%) | ||
tln-1 | NP_490886.2 | FERM_f0 | 4..84 | CDD:293120 | 3/14 (21%) |
B41 | 89..341 | CDD:214604 | 56/325 (17%) | ||
FERM_N | 91..>135 | CDD:286467 | 9/43 (21%) | ||
FERM_M | 232..341 | CDD:278785 | 30/162 (19%) | ||
FERM_C_Talin | 337..428 | CDD:269973 | 18/137 (13%) | ||
Talin_middle | 525..683 | CDD:286254 | 36/188 (19%) | ||
I_LWEQ | 698..>783 | CDD:302998 | 17/96 (18%) | ||
talin-RS | 1667..1839 | CDD:213393 | |||
VBS | 1863..1984 | CDD:286057 | |||
talin-RS | 1985..2146 | CDD:213393 | |||
ILWEQ | 2357..2549 | CDD:214607 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |